The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR7
  5. tki-miR7b

Accession: B67697677

Entry

ID: tki-miR7b
Alias: F1939.O001718.A11
Sequence: UGGAAGACUUGUGAUUUUGUUGUU
Description: mir-7 microRNA precursor predicted,partially
Species: 栝楼  Species latin name: Trichosanthes kirilowii
TCM Name: Tianhuafen(天花粉)   Gualou(瓜蒌)   Gualouzi(瓜蒌子)   Chaogualouzi(炒瓜蒌子)   Gualoupi(瓜蒌皮)  
TCM Resource (Sample number): 瓜蒌皮(1) 瓜蒌(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR7c; cmd-miR7c; lba-miR7b; pfr-miR7b; ppr-miR7b; sdi-miR7b; sor-miR7b; tki-miR7b;

Rfam Alignments

>> mir-7  mir-7 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0016   22.0   0.0  cm       15       38 ~~           1          24 + ~~ 1.00 5'&3' 0.33
                                ??       ????? ????????       NC
                         ~~~~~~-<<-------<<<<<-<<<<<<<<~~~~~~ CS
                mir-7  1 <[14]*UGGAAGACUAGuGAuUUUgUUGUu*[50]> 88
                               UGGAAGACU GUGAUUUUGUUGUU
            tki-miR7b  1 <[ 0]*UGGAAGACUUGUGAUUUUGUUGUU*[ 0]> 24
                         ......************************...... PP

Targets

Predicted by TargetFinder

NM_001048166 ;   NM_001256316 ;   NM_001282936 ;   NM_001282937 ;   NM_001282938 ;   NM_001282939 ;   NM_001322151 ;   NM_001322157 ;   NM_001322159 ;   NM_003035 ;   NM_031422 ;   NR_039867 ;  

Predicted by TAPIR

NM_001048166 ;   NM_001282936 ;   NM_001282937 ;   NM_001282938 ;   NM_001282939 ;   NM_001306219 ;   NM_001306220 ;   NM_001322151 ;   NM_001322152 ;   NM_001322154 ;   NM_001322156 ;   NM_001322157 ;   NM_001322158 ;   NM_001322159 ;   NM_001322161 ;   NM_001322162 ;   NM_001322164 ;   NM_001322165 ;   NM_001346899 ;   NM_001346900 ;   NM_001346941 ;   NM_003035 ;   NM_003205 ;   NM_005228 ;   NM_207036 ;   NM_207037 ;   NM_207038 ;   NM_207040 ;   NR_039867 ;