Entry

ID: sor-miR7b
Alias: F1939.O001718.A11
Sequence: UGGAAGACUUGUGAUUUUGUUGUU
Description: mir-7 microRNA precursor predicted,partially
Species: 豨莶 Species latin name: Sigesbeckia orientalis
TCM Name: Xixiancao(豨莶草)
TCM Resource (Sample number): 豨莶草(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR7c; cmd-miR7c; lba-miR7b; pfr-miR7b; ppr-miR7b; sdi-miR7b; sor-miR7b; tki-miR7b;

Rfam Alignments

>> mir-7  mir-7 microRNA precursor
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0016   22.0   0.0  cm       15       38 ~~           1          24 + ~~ 1.00 5'&3' 0.33
                                ??       ????? ????????       NC
                         ~~~~~~-<<-------<<<<<-<<<<<<<<~~~~~~ CS
                mir-7  1 <[14]*UGGAAGACUAGuGAuUUUgUUGUu*[50]> 88
                               UGGAAGACU GUGAUUUUGUUGUU
            tki-miR7b  1 <[ 0]*UGGAAGACUUGUGAUUUUGUUGUU*[ 0]> 24
                         ......************************...... PP

Targets

Predicted by TargetFinder

NM_001048166 ; NM_001256316 ; NM_001282936 ; NM_001282937 ; NM_001282938 ; NM_001282939 ; NM_001322151 ; NM_001322157 ; NM_001322159 ; NM_003035 ; NM_031422 ; NR_039867 ;

Predicted by TAPIR

NM_001048166 ; NM_001282936 ; NM_001282937 ; NM_001282938 ; NM_001282939 ; NM_001306219 ; NM_001306220 ; NM_001322151 ; NM_001322152 ; NM_001322154 ; NM_001322156 ; NM_001322157 ; NM_001322158 ; NM_001322159 ; NM_001322161 ; NM_001322162 ; NM_001322164 ; NM_001322165 ; NM_001346899 ; NM_001346900 ; NM_001346941 ; NM_003035 ; NM_003205 ; NM_005228 ; NM_207036 ; NM_207037 ; NM_207038 ; NM_207040 ; NR_039867 ;

The Bencao (Herbal) Database（本草数据库）

Accession: B62994648