The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR192
  5. tki-miR192

Accession: B68357279

Entry

ID: tki-miR192
Alias: F96713.N000069.A25*
Sequence: UGACCUAUGAAUUGACAGCCAGU
Description: mir-192/215 microRNA precursor predicted,partially
Species: 栝楼  Species latin name: Trichosanthes kirilowii
TCM Name: Tianhuafen(天花粉)   Gualou(瓜蒌)   Gualouzi(瓜蒌子)   Chaogualouzi(炒瓜蒌子)   Gualoupi(瓜蒌皮)  
TCM Resource (Sample number): 瓜蒌皮(1) 瓜蒌(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR192; Bswzz-miR192; acr-miR192a; bca-miR192a; bhi-miR192; cas-miR192; cba-miR192; cfe-miR192a; cit-miR192; cmd-miR192a; cmj-miR192; csp-miR192; esn-miR192; fmu-miR192; gel-miR192a; ljc-miR192; llu-miR192; pcn-miR192; poe-miR192; ppr-miR192a; run-miR192; sca-miR192; sdi-miR192; sgi-miR192; sor-miR192a; tki-miR192; zof-miR192a;

Rfam Alignments

>> mir-192  mir-192/215 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0091   18.2   0.0  cm       25       47 ~~           1          23 + ~~ 1.00 5'&3' 0.43
                                                              ??????? ??????????????        NC
                                                        ~~~~~~<<<<<<<-<<<<<<<<<<<<<<_~~~~~~ CS
                                             mir-192  1 <[24]*UGaCCUAUgAAuUGaCAGcCAgU*[59]> 106
                                                              UGACCUAUGAAUUGACAGCCAGU
                                         zof-miR192a  1 <[ 0]*UGACCUAUGAAUUGACAGCCAGU*[ 0]> 23
                                                        ......***********************...... PP

Targets

Predicted by TargetFinder

NR_029578 ;   NR_133638 ;   NR_144451 ;  

Predicted by TAPIR

NR_029578 ;   NR_133638 ;