The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR192
  5. zof-miR192a

Accession: B71069273

Entry

ID: zof-miR192a
Alias: F96713.N000069.A25*
Sequence: UGACCUAUGAAUUGACAGCCAGU
Description: mir-192/215 microRNA precursor predicted,partially
Species: 姜  Species latin name: Zingiber officinale
TCM Name: Ganjiang(干姜)   Paojiang(炮姜)   Shengjiang(生姜)  
TCM Resource (Sample number): 炮姜(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR192; Bswzz-miR192; acr-miR192a; bca-miR192a; bhi-miR192; cas-miR192; cba-miR192; cfe-miR192a; cit-miR192; cmd-miR192a; cmj-miR192; csp-miR192; esn-miR192; fmu-miR192; gel-miR192a; ljc-miR192; llu-miR192; pcn-miR192; poe-miR192; ppr-miR192a; run-miR192; sca-miR192; sdi-miR192; sgi-miR192; sor-miR192a; tki-miR192; zof-miR192a;

Rfam Alignments

>> mir-192  mir-192/215 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0091   18.2   0.0  cm       25       47 ~~           1          23 + ~~ 1.00 5'&3' 0.43
                                                              ??????? ??????????????        NC
                                                        ~~~~~~<<<<<<<-<<<<<<<<<<<<<<_~~~~~~ CS
                                             mir-192  1 <[24]*UGaCCUAUgAAuUGaCAGcCAgU*[59]> 106
                                                              UGACCUAUGAAUUGACAGCCAGU
                                         zof-miR192a  1 <[ 0]*UGACCUAUGAAUUGACAGCCAGU*[ 0]> 23
                                                        ......***********************...... PP

Targets

Predicted by TargetFinder

NR_029578 ;   NR_133638 ;   NR_144451 ;  

Predicted by TAPIR

NR_029578 ;   NR_133638 ;