The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR103
  5. acr-miR103b

Accession: B01875665

Entry

ID: acr-miR103b
Alias: F16365.N000033.A25
Sequence: AGCAGCAUUGUACAGGGCUAUGU
Description: mir-103/107 microRNA precursor predicted,partially
Species: 乌头  Species latin name: Aconitum carmichaelii
TCM Name: Chuanwu(川乌)   Zhichuanwu(制川乌)   Fuzi(附子)  
TCM Resource (Sample number): 川乌(1) 附子(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR103c; acr-miR103b; asc-miR103b; bch-miR103b; bhi-miR103c; cci-miR103b; cfe-miR103b; cit-miR103d; cmd-miR103c; fmu-miR103b; hcr-miR103c; ljp-miR103b; poe-miR103d; sgi-miR103b; sor-miR103e; tch-miR103b; zof-miR103b;

Rfam Alignments

>> mir-103  mir-103/107 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0036   19.8   0.0  cm       48       69 ~.           1          22 + ~. 1.00    5' 0.50
                                                                   ???????????    ??   ? NC
                                                            ~~~~~~_>>>>>>>>>>>---->>---> CS
                                                 mir-103 10 <[38]*AGCAgCAuUGUACAGGGCUAUg 69
                                                                  AGCAGCAUUGUACAGGGCUAUG
                                             zof-miR103b  1 <[ 0]*AGCAGCAUUGUACAGGGCUAUG 22
                                                            ......********************** PP

Targets

Predicted by TargetFinder

NM_001144960 ;   NM_001315505 ;   NM_001315506 ;   NM_002180 ;   NM_006764 ;   NR_031721 ;   NR_031722 ;  

Predicted by TAPIR

NM_002180 ;   NR_031721 ;   NR_031722 ;