Entry

ID: cco-miR159ba
Alias: F2320.K000086.A11
Sequence: UUUGGAUUGAAGGGAGCUAU
Description: microRNA MIR159 predicted
Species: 补骨脂 Species latin name: Cullen corylifolium
TCM Name: Buguzhi(补骨脂)
TCM Resource (Sample number): 补骨脂(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR159i; apl-miR159ay; cco-miR159ba; gma-miR159as; lpu-miR159bi; por-miR159aw; smi-miR159ap; sto-miR159an; vum-miR159k;

Rfam Alignments

>> MIR159  microRNA MIR159
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0077   16.5   0.0  cm      164      181 ~.           1          18 + ~. 1.00    5' 0.44
                                   ???????  ??????? NC
                          ~~~~~~~-->>>>>>>-->>>>>>> CS
               MIR159  14 <[150]*uUUGGAcuGAAGGGAGCU 181
                                 UUUGGA UGAAGGGAGCU
          vum-miR159k   1 <[  0]*UUUGGAUUGAAGGGAGCU 18
                          .......****************** PP

Targets

Predicted by TargetFinder

NM_001077484 ; NM_001167671 ; NM_001167672 ; NM_001195272 ; NM_001278387 ; NM_001278388 ; NM_001278389 ; NM_001278390 ; NM_005445 ; NM_005578 ; NM_014906 ; NM_030674 ; NM_138694 ; NM_153267 ; NM_170724 ; NR_002227 ; NR_048561 ; NR_120611 ; NR_125850 ;

Predicted by TAPIR

NM_000369 ; NM_001018036 ; NM_001142626 ; NM_003297 ; NM_005445 ; NM_014906 ; NM_018259 ; NR_048561 ; NR_134315 ;

The Bencao (Herbal) Database（本草数据库）

Accession: B14614334