The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR159
  5. Bjl-miR159i

Accession: B72031691

Entry

ID: Bjl-miR159i
Alias: F2320.K000086.A11
Sequence: UUUGGAUUGAAGGGAGCUAU
Description: microRNA MIR159 predicted
Species: 焦榔  Species latin name: -
TCM Name:
TCM Resource (Sample number): 焦榔(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR159i; apl-miR159ay; cco-miR159ba; gma-miR159as; lpu-miR159bi; por-miR159aw; smi-miR159ap; sto-miR159an; vum-miR159k;

Rfam Alignments

>> MIR159  microRNA MIR159
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0077   16.5   0.0  cm      164      181 ~.           1          18 + ~. 1.00    5' 0.44
                                   ???????  ??????? NC
                          ~~~~~~~-->>>>>>>-->>>>>>> CS
               MIR159  14 <[150]*uUUGGAcuGAAGGGAGCU 181
                                 UUUGGA UGAAGGGAGCU
          vum-miR159k   1 <[  0]*UUUGGAUUGAAGGGAGCU 18
                          .......****************** PP

Targets

Predicted by TargetFinder

NM_001077484 ;   NM_001167671 ;   NM_001167672 ;   NM_001195272 ;   NM_001278387 ;   NM_001278388 ;   NM_001278389 ;   NM_001278390 ;   NM_005445 ;   NM_005578 ;   NM_014906 ;   NM_030674 ;   NM_138694 ;   NM_153267 ;   NM_170724 ;   NR_002227 ;   NR_048561 ;   NR_120611 ;   NR_125850 ;  

Predicted by TAPIR

NM_000369 ;   NM_001018036 ;   NM_001142626 ;   NM_003297 ;   NM_005445 ;   NM_014906 ;   NM_018259 ;   NR_048561 ;   NR_134315 ;