The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR9
  5. tki-miR9j

Accession: B68212722

Entry

ID: tki-miR9j
Alias: F28644.P000059.A25
Sequence: UCUUUGGUUAUCUAGCUGUAUGAAA
Description: mir-9/mir-79 microRNA precursor family predicted,partially
Species: 栝楼  Species latin name: Trichosanthes kirilowii
TCM Name: Tianhuafen(天花粉)   Gualou(瓜蒌)   Gualouzi(瓜蒌子)   Chaogualouzi(炒瓜蒌子)   Gualoupi(瓜蒌皮)  
TCM Resource (Sample number): 瓜蒌皮(1) 瓜蒌(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bswzz-miR9c; cof-miR9h; llu-miR9d; tki-miR9j;

Rfam Alignments

>> mir-9  mir-9/mir-79 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0013   22.6   0.0  cm        2       26 ~~           1          25 + ~~ 0.99 5'&3' 0.32
                                                                    ???????????????  ????         NC
                                                             ~~~~~::<<<<<<<<<<<<<<<--<<<<__~~~~~~ CS
                                                    mir-9  1 <[1]*UCUUuGGUuaucUAGCUGUAUGAGU*[36]> 62
                                                                  UCUUUGGUUAUCUAGCUGUAUGA
                                                tki-miR9j  1 <[0]*UCUUUGGUUAUCUAGCUGUAUGAAA*[ 0]> 25
                                                             .....***********************99...... PP

Targets

Predicted by TargetFinder


Predicted by TAPIR