The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR92
  5. tki-miR92c

Accession: B68067937

Entry

ID: tki-miR92c
Alias: F11410.N000050.A25
Sequence: UAUUGCACUUGUCCCGGCCUGUU
Description: mir-92 microRNA precursor family predicted,partially
Species: 栝楼  Species latin name: Trichosanthes kirilowii
TCM Name: Tianhuafen(天花粉)   Gualou(瓜蒌)   Gualouzi(瓜蒌子)   Chaogualouzi(炒瓜蒌子)   Gualoupi(瓜蒌皮)  
TCM Resource (Sample number): 瓜蒌皮(1) 瓜蒌(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR92h; Bswzz-miR92c; asc-miR92c; bca-miR92d; bhi-miR92d; cfe-miR92d; cit-miR92ai; cmd-miR92e; cof-miR92c; csu-miR92d; esn-miR92d; fsu-miR92c; hcr-miR92d; lgr-miR92c; ljn-miR92c; mpu-miR92c; poe-miR92e; ppr-miR92c; pvl-miR92c; sar-miR92c; sor-miR92f; tch-miR92d; tki-miR92c;

Rfam Alignments

>> mir-92  mir-92 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00073   19.9   0.0  cm       50       72 ~~           1          23 + ~~ 1.00 5'&3' 0.52
                                                             ????????? ????? ??????       NC
                                                       ~~~~~~>>>>>>>>>->>>>>->>>>>>-~~~~~ CS
                                             mir-92  1 <[49]*uAuUGCACuUgUCCCGGCCugug*[8]> 80
                                                             UAUUGCACUUGUCCCGGCCUGU+
                                         tki-miR92c  1 <[ 0]*UAUUGCACUUGUCCCGGCCUGUU*[0]> 23
                                                       ......***********************..... PP

Targets

Predicted by TargetFinder

NM_015629 ;   NM_018989 ;  

Predicted by TAPIR

NM_173829 ;