The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR8
  5. tki-miR8h

Accession: B68110859

Entry

ID: tki-miR8h
Alias: F14883.N000390.A25
Sequence: UAAUACUGCCGGGUAAUGAUGGA
Description: mir-8/mir-141/mir-200 microRNA precursor family predicted,partially
Species: 栝楼  Species latin name: Trichosanthes kirilowii
TCM Name: Tianhuafen(天花粉)   Gualou(瓜蒌)   Gualouzi(瓜蒌子)   Chaogualouzi(炒瓜蒌子)   Gualoupi(瓜蒌皮)  
TCM Resource (Sample number): 瓜蒌皮(1) 瓜蒌(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR8j; Bswzz-miR8c; bca-miR8j; bch-miR8h; bhi-miR8b; cba-miR8a; cfe-miR8h; cit-miR8g; cma-miR8; cmd-miR8l; cso-miR8; csp-miR8g; ehu-miR8a; esn-miR8c; fmu-miR8g; fsu-miR8b; gel-miR8e; hcr-miR8i; lba-miR8b; poe-miR8l; ppr-miR8j; sbc-miR8b; sch-miR8c; sdi-miR8i; sgi-miR8h; sor-miR8f; tch-miR8b; tki-miR8h; vph-miR8h; zof-miR8i;

Rfam Alignments

>> mir-8  mir-8/mir-141/mir-200 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0048   19.0   0.0  cm       48       69 ~.           1          22 + ~. 1.00    5' 0.45
                                                                 ?????????   ???? ????? NC
                                                           ~~~~~~>>>>>>>>>--->>>>->>>>> CS
                                                  mir-8  9 <[39]*uAAcACUGcCUGGUAAuGAUGg 69
                                                                 UAA ACUGCC GGUAAUGAUGG
                                              zof-miR8i  1 <[ 0]*UAAUACUGCCGGGUAAUGAUGG 22
                                                           ......9********************* PP

Targets

Predicted by TargetFinder

NM_031435 ;  

Predicted by TAPIR

NM_031435 ;