The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR8
  5. tki-miR8f

Accession: B67946582

Entry

ID: tki-miR8f
Alias: F6191.N000030.A25
Sequence: UAACACUGUCUGGUAACGAUGUU
Description: mir-8/mir-141/mir-200 microRNA precursor family predicted,partially
Species: 栝楼  Species latin name: Trichosanthes kirilowii
TCM Name: Tianhuafen(天花粉)   Gualou(瓜蒌)   Gualouzi(瓜蒌子)   Chaogualouzi(炒瓜蒌子)   Gualoupi(瓜蒌皮)  
TCM Resource (Sample number): 瓜蒌皮(1) 瓜蒌(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR8g; asc-miR8b; bca-miR8h; bch-miR8g; cas-miR8c; cfe-miR8g; cit-miR8f; cmd-miR8i; cri-miR8; esn-miR8a; fmu-miR8f; gel-miR8d; hcr-miR8h; llu-miR8c; pgi-miR8; poe-miR8h; ppr-miR8h; pvl-miR8b; sad-miR8a; sbc-miR8a; sch-miR8b; sdi-miR8f; sgi-miR8f; sor-miR8e; tki-miR8f; vph-miR8g; zof-miR8d;

Rfam Alignments

>> mir-8  mir-8/mir-141/mir-200 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0028   19.8   0.0  cm       48       68 ~.           1          21 + ~. 1.00    5' 0.43
                                                               ?????????   ???? ???? NC
                                                         ~~~~~~>>>>>>>>>--->>>>->>>> CS
                                                mir-8 10 <[38]*uAAcACUGcCUGGUAAuGAUG 68
                                                               UAACACUG CUGGUAA GAUG
                                            zof-miR8d  1 <[ 0]*UAACACUGUCUGGUAACGAUG 21
                                                         ......9******************** PP

Targets

Predicted by TargetFinder

NR_136677 ;  

Predicted by TAPIR

NR_136677 ;