The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR8
  5. tki-miR8c

Accession: B67858104

Entry

ID: tki-miR8c
Alias: F4014.O000009.B25
Sequence: UAAUACUGCCUGGUAAUGAUGACU
Description: mir-8/mir-141/mir-200 microRNA precursor family predicted,partially
Species: 栝楼  Species latin name: Trichosanthes kirilowii
TCM Name: Tianhuafen(天花粉)   Gualou(瓜蒌)   Gualouzi(瓜蒌子)   Chaogualouzi(炒瓜蒌子)   Gualoupi(瓜蒌皮)  
TCM Resource (Sample number): 瓜蒌皮(1) 瓜蒌(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Yes

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR8d; Bswzz-miR8a; bca-miR8d; cfe-miR8d; cit-miR8c; cmd-miR8e; csp-miR8b; fmu-miR8c; hcr-miR8d; llu-miR8a; poe-miR8d; ppr-miR8d; sdi-miR8d; sgi-miR8c; sor-miR8c; tki-miR8c; zof-miR8b;

Rfam Alignments

>> mir-8  mir-8/mir-141/mir-200 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0015   20.9   0.0  cm       48       69 ~.           1          22 + ~. 1.00    5' 0.36
                                                            ?????????   ???? ????? NC
                                                      ~~~~~~>>>>>>>>>--->>>>->>>>> CS
                                             mir-8  9 <[39]*uAAcACUGcCUGGUAAuGAUGg 69
                                                            UAA ACUGCCUGGUAAUGAUG
                                         zof-miR8b  1 <[ 0]*UAAUACUGCCUGGUAAUGAUGA 22
                                                      ......9********************* PP

Targets

Predicted by TargetFinder


Predicted by TAPIR

NM_001267722 ;   NM_006947 ;   NR_151856 ;