The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR23
  5. tki-miR23b

Accession: B68151706

Entry

ID: tki-miR23b
Alias: F19267.O000049.A25
Sequence: AUCACAUUGCCAGGGAUUACCACU
Description: microRNA mir-23 predicted
Species: 栝楼  Species latin name: Trichosanthes kirilowii
TCM Name: Tianhuafen(天花粉)   Gualou(瓜蒌)   Gualouzi(瓜蒌子)   Chaogualouzi(炒瓜蒌子)   Gualoupi(瓜蒌皮)  
TCM Resource (Sample number): 瓜蒌皮(1) 瓜蒌(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR23f; acr-miR23e; asc-miR23e; bca-miR23f; bch-miR23e; bpi-miR23d; cas-miR23; cci-miR23c; cfe-miR23f; cit-miR23ar; cmd-miR23j; csp-miR23d; ehu-miR23a; esn-miR23a; gel-miR23c; hcr-miR23i; lba-miR23; ljp-miR23c; poe-miR23ah; ppr-miR23d; sch-miR23b; sdf-miR23b; sdi-miR23; sln-miR23; sor-miR23aq; tki-miR23b; vph-miR23b; zof-miR23g;

Rfam Alignments

>> mir-23  microRNA mir-23
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   3.3e-05   25.4   0.0  cm       47       70 ~~           1          24 + ~~ 1.00 5'&3' 0.46
                                                             ???      ?????????            NC
                                                       ~~~~~~>>>------>>>>>>>>>::::::~~~~~ CS
                                             mir-23  1 <[46]*AUCACAUUGCCAGGGAuUuCCAac*[5]> 75
                                                             AUCACAUUGCCAGGGAUU+CCA++
                                         zof-miR23g  1 <[ 0]*AUCACAUUGCCAGGGAUUACCACU*[0]> 24
                                                       ......************************..... PP

Targets

Predicted by TargetFinder


Predicted by TAPIR