The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR21
  5. tki-miR21a

Accession: B67709856

Entry

ID: tki-miR21a
Alias: F2083.N000075.A25
Sequence: UAGCUUAUCAGACUGGUGUUGGC
Description: microRNA mir-21 predicted
Species: 栝楼  Species latin name: Trichosanthes kirilowii
TCM Name: Tianhuafen(天花粉)   Gualou(瓜蒌)   Gualouzi(瓜蒌子)   Chaogualouzi(炒瓜蒌子)   Gualoupi(瓜蒌皮)  
TCM Resource (Sample number): 天花粉(1) 瓜蒌(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

act-miR21; bca-miR21a; car-miR21a; cfe-miR21a; cmd-miR21a; cri-miR21a; fsu-miR21; gel-miR21a; ljo-miR21; mal-miR21; pfr-miR21a; ppr-miR21a; pvl-miR21; tki-miR21a; zof-miR21a;

Rfam Alignments

>> mir-21  microRNA mir-21
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0046   20.2   0.0  cm        8       30 ~~           1          23 + ~~ 1.00 5'&3' 0.48
                                                              ????????  ????? ????? ?       NC
                                                         ~~~~~<<<<<<<<--<<<<<-<<<<<-<~~~~~~ CS
                                               mir-21  1 <[7]*uAGCuuAuCAGACuGgUGUuGgC*[42]> 72
                                                              UAGCUUAUCAGACUGGUGUUGGC
                                           zof-miR21a  1 <[0]*UAGCUUAUCAGACUGGUGUUGGC*[ 0]> 23
                                                         .....***********************...... PP

Targets

Predicted by TargetFinder


Predicted by TAPIR