The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR10
  5. tki-miR10v

Accession: B68302792

Entry

ID: tki-miR10v
Alias: F59528.M000001.A25
Sequence: ACCCUGUAGAACCGAAUUUGUG
Description: mir-10 microRNA precursor family predicted,partially
Species: 栝楼  Species latin name: Trichosanthes kirilowii
TCM Name: Tianhuafen(天花粉)   Gualou(瓜蒌)   Gualouzi(瓜蒌子)   Chaogualouzi(炒瓜蒌子)   Gualoupi(瓜蒌皮)  
TCM Resource (Sample number): 瓜蒌皮(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR10aw; bpi-miR10h; cfe-miR10av; cit-miR10bl; cmd-miR10av; esn-miR10m; fsu-miR10n; hcr-miR10s; lgr-miR10c; ppr-miR10r; pvl-miR10p; sch-miR10h; sgi-miR10q; tki-miR10v;

Rfam Alignments

>> mir-10  mir-10 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00065   20.7   0.0  cm        9       30 ~~           1          22 + ~~ 1.00 5'&3' 0.45
                                                               ???   ???????????????       NC
                                                         ~~~~~-<<<---<<<<<<<<<<<<<<<~~~~~~ CS
                                               mir-10  1 <[8]*ACCCUGUAGAucCGAacuUGUG*[45]> 75
                                                              ACCCUGUAGA CCGAA UUGUG
                                           tki-miR10v  1 <[0]*ACCCUGUAGAACCGAAUUUGUG*[ 0]> 22
                                                         .....**********************...... PP

Targets

Predicted by TargetFinder


Predicted by TAPIR