The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR146
  5. tki-miR146c

Accession: B68033684

Entry

ID: tki-miR146c
Alias: F9241.M000025.A25
Sequence: UGAGAACUGAAUUCCAUGGGUG
Description: microRNA mir-146 predicted
Species: 栝楼  Species latin name: Trichosanthes kirilowii
TCM Name: Tianhuafen(天花粉)   Gualou(瓜蒌)   Gualouzi(瓜蒌子)   Chaogualouzi(炒瓜蒌子)   Gualoupi(瓜蒌皮)  
TCM Resource (Sample number): 瓜蒌皮(1) 瓜蒌(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR146h; asc-miR146c; cfe-miR146h; cit-miR146g; poe-miR146f; sor-miR146e; tki-miR146c;

Rfam Alignments

>> mir-146  microRNA mir-146
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0013   21.2   0.0  cm       16       37 ~~           1          22 + ~~ 0.99 5'&3' 0.45
                                                               ????????       ????        NC
                                                       ~~~~~~--<<<<<<<<-------<<<<_~~~~~~ CS
                                            mir-146  1 <[15]*UGAGAACUGAAUUCCAUgGgcU*[53]> 90
                                                             UGAGAACUGAAUUCCAUGGG
                                        tki-miR146c  1 <[ 0]*UGAGAACUGAAUUCCAUGGGUG*[ 0]> 22
                                                       ......*********************9...... PP

Targets

Predicted by TargetFinder


Predicted by TAPIR

NM_001358312 ;   NM_001358312 ;   NM_007137 ;