Entry

ID: por-miR159bm
Alias: F26587.L000021.A11*
Sequence: UUUGGAUUGAAGGGAGCUCCG
Description: microRNA MIR159 predicted
Species: 侧柏 Species latin name: Platycladus orientalis
TCM Name: Cebaiye(侧柏叶) Baiziren(柏子仁)
TCM Resource (Sample number): 侧柏叶(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bbj-miR159d; apl-miR159br; ccs-miR159be; cmd-miR159m; cmj-miR159g; gbi-miR159r; hcr-miR159l; ini-miR159o; pav-miR159az; por-miR159bm; pvl-miR159at;

Rfam Alignments

>> MIR159  microRNA MIR159
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0013   19.6   0.0  cm      164      183 ~.           1          20 + ~. 1.00    5' 0.50
                                   ???????  ????????  NC
                          ~~~~~~~-->>>>>>>-->>>>>>>>: CS
               MIR159  13 <[151]*uUUGGAcuGAAGGGAGCUCC 183
                                 UUUGGA UGAAGGGAGCUCC
         pvl-miR159at   1 <[  0]*UUUGGAUUGAAGGGAGCUCC 20
                          .......******************** PP

Targets

Predicted by TargetFinder

NM_001195272 ; NM_001271634 ; NM_001370182 ; NM_001370183 ; NM_001370184 ; NM_001370185 ; NM_001370186 ; NM_005444 ; NM_031912 ; NM_138694 ; NM_170724 ; NM_181519 ; NR_073390 ;

Predicted by TAPIR

NM_001271634 ; NM_001370182 ; NM_001370183 ; NM_001370184 ; NM_001370185 ; NM_001370186 ; NM_005444 ; NM_031912 ; NM_181519 ; NR_073390 ; NR_146089 ;

The Bencao (Herbal) Database（本草数据库）

Accession: B54627428