Entry

ID: sch-miR166j
Alias: F77.L000047.A11
Sequence: UCGGACCAGGCUUCAUCCCCU
Description: mir-166 microRNA precursor predicted,partially
Species: 阴行草 Species latin name: Siphonostegia chinensis
TCM Name: Beiliujinu(北刘寄奴)
TCM Resource (Sample number): 北刘寄奴(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR166d; cmd-miR166e; cof-miR166ai; gbi-miR166aj; pfr-miR166an; sch-miR166j; sdi-miR166e;

Rfam Alignments

>> mir-166  mir-166 microRNA precursor
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00095   20.0   0.0  cm      101      120 ~.           1          20 + ~. 1.00    5' 0.65
                                ???  ??????  ??????? NC
                          ~~~~~~>>>-->>>>>>-->>>>>>> CS
              mir-166   7 <[94]*UCGGACCAGGCUUCAUUCCc 120
                                UCGGACCAGGCUUCAU CCC
          sdi-miR166e   1 <[ 0]*UCGGACCAGGCUUCAUCCCC 20
                          ......******************** PP

Targets

Predicted by TargetFinder

NM_015221 ; NM_017811 ;

Predicted by TAPIR

NM_001080513 ; NM_001291988 ; NM_001316309 ; NM_015221 ; NM_017811 ;

The Bencao (Herbal) Database（本草数据库）

Accession: B60042095