The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR166
  5. cof-miR166ai

Accession: B21188701

Entry

ID: cof-miR166ai
Alias: F77.L000047.A11
Sequence: UCGGACCAGGCUUCAUCCCCU
Description: mir-166 microRNA precursor predicted,partially
Species: 山茱萸  Species latin name: Cornus officinalis
TCM Name: Shanzhuyu(山茱萸)  
TCM Resource (Sample number): 山茱萸(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR166d; cmd-miR166e; cof-miR166ai; gbi-miR166aj; pfr-miR166an; sch-miR166j; sdi-miR166e;

Rfam Alignments

>> mir-166  mir-166 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00095   20.0   0.0  cm      101      120 ~.           1          20 + ~. 1.00    5' 0.65
                                ???  ??????  ??????? NC
                          ~~~~~~>>>-->>>>>>-->>>>>>> CS
              mir-166   7 <[94]*UCGGACCAGGCUUCAUUCCc 120
                                UCGGACCAGGCUUCAU CCC
          sdi-miR166e   1 <[ 0]*UCGGACCAGGCUUCAUCCCC 20
                          ......******************** PP

Targets

Predicted by TargetFinder

NM_015221 ;   NM_017811 ;  

Predicted by TAPIR

NM_001080513 ;   NM_001291988 ;   NM_001316309 ;   NM_015221 ;   NM_017811 ;