Entry

ID: smi-miR159aq
Alias: F8826.K000052.A11*
Sequence: UUUGGAUUGAAGGGAGCUUU
Description: microRNA MIR159 predicted
Species: 丹参 Species latin name: Salvia miltiorrhiza
TCM Name: Danshen(丹参)
TCM Resource (Sample number): 丹参(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR159j; apl-miR159bc; cco-miR159bc; cof-miR159k; csm-miR159g; cso-miR159h; csp-miR159aj; csu-miR159g; ehu-miR159i; gja-miR159e; gma-miR159at; lfo-miR159i; llc-miR159k; lpu-miR159bl; mca-miR159ar; nnu-miR159av; pav-miR159as; pcn-miR159j; por-miR159az; psu-miR159ao; pvl-miR159an; rch-miR159al; rcr-miR159av; rja-miR159av; smi-miR159aq; sto-miR159aq; tci-miR159h;

Rfam Alignments

>> MIR159  microRNA MIR159
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0077   16.5   0.0  cm      164      181 ~.           1          18 + ~. 1.00    5' 0.44
                       ???????  ??????? NC
              ~~~~~~~-->>>>>>>-->>>>>>> CS
   MIR159  14 <[150]*uUUGGAcuGAAGGGAGCU 181
                     UUUGGA UGAAGGGAGCU
tci-miR159h   1 <[  0]*UUUGGAUUGAAGGGAGCU 18
              .......****************** PP

Targets

Predicted by TargetFinder

NM_001167671 ; NM_001167672 ; NM_001195272 ; NM_001249 ; NM_001271634 ; NM_001321985 ; NM_001321986 ; NM_001321987 ; NM_001321988 ; NM_001351444 ; NM_005444 ; NM_005578 ; NM_006456 ; NM_014906 ; NM_015021 ; NM_054107 ; NM_138694 ; NM_170724 ; NR_048561 ; NR_073390 ; NR_135572 ; NR_146089 ;

Predicted by TAPIR

NM_001080534 ; NM_001135109 ; NM_001195272 ; NM_001206671 ; NM_001206672 ; NM_001249 ; NM_001321618 ; NM_001321985 ; NM_001329919 ; NM_001346690 ; NM_001346691 ; NM_001346692 ; NM_001346694 ; NM_001522 ; NM_003609 ; NM_024557 ; NM_138694 ; NM_170724 ; NR_134315 ; NR_135572 ; NR_144497 ;

The Bencao (Herbal) Database（本草数据库）

Accession: B62553107