Entry

ID: lpu-miR159ax
Alias: F279.L000303.A25
Sequence: UGGACUGAAGGGAGCUCCUCC
Description: microRNA MIR159 predicted
Species: 扁豆 Species latin name: Lablab purpureus
TCM Name: Baibiandou(白扁豆)
TCM Resource (Sample number): 白扁豆(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

cco-miR159at; gma-miR159an; lpu-miR159ax; ssu-miR159k;

Rfam Alignments

>> MIR159  microRNA MIR159
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0031   18.1   0.0  cm      166      185 ~.           1          20 + ~. 1.00    5' 0.60
                                                                  ???????  ????????    NC
                                                           ~~~~~~~>>>>>>>-->>>>>>>>::: CS
                                                MIR159  13 <[153]*UGGAcuGAAGGGAGCUCCuu 185
                                                                  UGGACUGAAGGGAGCUCCU+
                                           ssu-miR159k   1 <[  0]*UGGACUGAAGGGAGCUCCUC 20
                                                           .......******************** PP

Targets

Predicted by TargetFinder

NM_001083592 ; NM_001166347 ; NM_001166348 ; NM_001166349 ; NM_001276418 ; NM_005012 ; NM_014866 ; NM_014906 ; NM_024923 ; NM_173626 ; NR_048561 ;

Predicted by TAPIR

NM_001083592 ; NM_001166347 ; NM_001166348 ; NM_001166349 ; NM_001243540 ; NM_001243541 ; NM_001276418 ; NM_001286191 ; NM_001286192 ; NM_001286195 ; NM_001286196 ; NM_001286197 ; NM_001286198 ; NM_003594 ; NM_005012 ; NM_014866 ; NM_014906 ; NM_020202 ; NM_022895 ; NM_032970 ; NM_173626 ; NR_048561 ; NR_104409 ; NR_121582 ;

The Bencao (Herbal) Database（本草数据库）

Accession: B43886995