The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR8
  5. lji-miR8a

Accession: B41990232

Entry

ID: lji-miR8a
Alias: F11547.N000002.A25
Sequence: UAAUACUGUCAGGUAAAGAUGUC
Description: mir-8/mir-141/mir-200 microRNA precursor family like,predicted,partially
Species: 益母草  Species latin name: Leonurus japonicus
TCM Name: Chongweizi(茺蔚子)   Yimucao(益母草)  
TCM Resource (Sample number): 茺蔚子(1) 益母草(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR8h; Bsr-miR8a; acr-miR8c; act-miR8a; ccs-miR8a; cmd-miR8j; cof-miR8a; cph-miR8a; csp-miR8e; hvu-miR8a; ljc-miR8a; lji-miR8a; llc-miR8; llu-miR8d; mda-miR8; pas-miR8; poe-miR8i; rch-miR8a; run-miR8a; sar-miR8a; sba-miR8a; sdi-miR8g; sgl-miR8a; tfa-miR8a; tmo-miR8a; twi-miR8a; zof-miR8e;

Rfam Alignments

>> mir-8  mir-8/mir-141/mir-200 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0069   18.5   0.0  cm       48       68 ~.           1          21 + ~. 1.00    5' 0.33
                                                              ?????????   ???? ???? NC
                                                        ~~~~~~>>>>>>>>>--->>>>->>>> CS
                                               mir-8 10 <[38]*uAAcACUGcCUGGUAAuGAUG 68
                                                              UAA ACUG C GGUAA+GAUG
                                           zof-miR8e  1 <[ 0]*UAAUACUGUCAGGUAAAGAUG 21
                                                        ......9******************** PP

Targets

Predicted by TargetFinder

NM_001301085 ;   NM_006775 ;   NM_031435 ;   NM_206853 ;   NM_206854 ;   NM_206855 ;  

Predicted by TAPIR

NM_000214 ;   NM_031435 ;