The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR166
  5. cco-miR166af

Accession: B14425683

Entry

ID: cco-miR166af
Alias: F37.L000106.A3D*
Sequence: UCGGACCAGGCUUCAUUCCUC
Description: MIR166 putative
Species: 补骨脂  Species latin name: Cullen corylifolium
TCM Name: Buguzhi(补骨脂)  
TCM Resource (Sample number): 补骨脂(1)
Predicted by Mirnovo: -
Evidence support: Mirbase|infernal
Experimental status: Not yet

Homologs

miRBase Homologs

aqc-miR166a; aqc-miR166d; cme-miR166e; dpr-miR166a; lus-miR166e; mtr-miR166c; mtr-miR166f; osa-miR166g-3p; osa-miR166h-3p; pab-miR166a; sbi-miR166f; sly-miR166c-3p; ssl-miR166a; stu-miR166b; tcc-miR166c; zma-miR166l-3p; zma-miR166m-3p;

Bencao Homologs

Bsr-miR166e; Btmz-miR166d; aan-miR166d; ade-miR166d; aha-miR166e; ala-miR166e; amc-miR166c; aox-miR166c; apa-miR166d; apl-miR166f; asc-miR166b; att-miR166c; bhi-miR166c; bpi-miR166c; car-miR166f; cas-miR166d; cau-miR166d; cco-miR166af; ccs-miR166af; cde-miR166c; cid-miR166e; cja-miR166d; cmd-miR166d; cmi-miR166b; cmj-miR166c; cmn-miR166d; cmo-miR166e; cof-miR166ag; cpe-miR166c; csp-miR166e; csu-miR166c; dst-miR166g; efo-miR166d; epr-miR166ag; esc-miR166b; est-miR166f; fsu-miR166e; gbi-miR166ah; gmc-miR166e; gpe-miR166d; hcr-miR166ai; hmu-miR166e; hof-miR166e; iba-miR166f; ija-miR166e; ili-miR166d; ini-miR166f; ksc-miR166b; lch-miR166c; lcr-miR166d; lfo-miR166e; lgr-miR166d; ljc-miR166e; lji-miR166d; ljn-miR166d; ljp-miR166e; llc-miR166f; lln-miR166d; mca-miR166ah; mch-miR166e; nja-miR166d; nnu-miR166ae; nsc-miR166d; nte-miR166e; pas-miR166e; pav-miR166e; pca-miR166b; pcl-miR166g; pfr-miR166ai; por-miR166e; pvl-miR166ai; rch-miR166ae; rcr-miR166e; rja-miR166d; rte-miR166e; sad-miR166d; sar-miR166c; sba-miR166d; sbc-miR166d; sch-miR166f; sdi-miR166c; smn-miR166e; sor-miR166e; ssa-miR166e; sto-miR166d; tci-miR166e; tja-miR166c; tmo-miR166d; vof-miR166f; vtr-miR166f;

Rfam Alignments

>> mir-166  mir-166 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00011   23.1   0.0  cm      101      121 ~~           1          21 + ~~ 1.00 5'&3' 0.57
                                                                    ???  ??????  ????????      NC
                                                             ~~~~~~~>>>-->>>>>>-->>>>>>>>~~~~~ CS
                                                 mir-166   1 <[100]*UCGGACCAGGCUUCAUUCCcC*[5]> 126
                                                                    UCGGACCAGGCUUCAUUCC C
                                             vtr-miR166f   1 <[  0]*UCGGACCAGGCUUCAUUCCUC*[0]> 21
                                                             .......*********************..... PP

Targets

Predicted by TargetFinder

NM_015221 ;  

Predicted by TAPIR

NM_001367835 ;   NM_015221 ;   NM_017811 ;   NM_144717 ;   NM_175736 ;   NM_198900 ;