Entry

ID: cco-miR159ap
Alias: F279.K000190.A11
Sequence: AUUGGAUUGAAGGGAGCUCC
Description: microRNA MIR159 predicted
Species: 补骨脂 Species latin name: Cullen corylifolium
TCM Name: Buguzhi(补骨脂)
TCM Resource (Sample number): 补骨脂(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

apl-miR159as; cco-miR159ap; gma-miR159al; lpu-miR159at; mca-miR159am; vum-miR159i;

Rfam Alignments

>> MIR159  microRNA MIR159
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0014   19.5   0.0  cm      164      183 ~~           1          20 + ~~ 1.00 5'&3' 0.50
                                   ???????  ????????        NC
                          ~~~~~~~-->>>>>>>-->>>>>>>>:~~~~~~ CS
               MIR159   1 <[163]*uUUGGAcuGAAGGGAGCUCC*[13]> 196
                                 +UUGGA UGAAGGGAGCUCC
          vum-miR159i   1 <[  0]*AUUGGAUUGAAGGGAGCUCC*[ 0]> 20
                          .......********************...... PP

Targets

Predicted by TargetFinder

NM_001010915 ; NM_001195272 ; NM_001242412 ; NM_001267556 ; NM_001267558 ; NM_001267559 ; NM_001271634 ; NM_001300860 ; NM_001321883 ; NM_001321903 ; NM_001367774 ; NM_005288 ; NM_005444 ; NM_007238 ; NM_013232 ; NM_014829 ; NM_020731 ; NM_138694 ; NM_170724 ; NM_183397 ; NM_198279 ; NR_003713 ; NR_073390 ; NR_125341 ;

Predicted by TAPIR

NM_001010915 ; NM_001242412 ; NM_001267556 ; NM_001267558 ; NM_001267559 ; NM_001271634 ; NM_001300860 ; NM_001321883 ; NM_001321903 ; NM_005444 ; NM_007238 ; NM_013232 ; NM_014829 ; NM_020731 ; NM_138694 ; NM_170724 ; NM_183397 ; NR_003713 ; NR_073390 ; NR_125341 ; NR_146089 ;

The Bencao (Herbal) Database（本草数据库）

Accession: B14508701