The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. sRNA Atlas
  4. F10030
  5. B68902425

Accession: B68902425

Entry

ID: -
Alias: F10030.K000104.A11
Sequence: CGGGCUUCUUGAUCUUCUGA
Description: astro_FSE ribosomal frameshift site
Species: 吴茱萸  Species latin name: Tetradium ruticarpum
TCM Names: Wuzhuyu(吴茱萸)  
TCM Resource (Sample number): 吴茱萸(1)
Evidence support:
Experimental status: Not yet
Database: sRNA Atlas

Homologs

miRBase Homologs

None

Bencao Homologs

None

Rfam Alignments

>> astro_FSE  ribosomal frameshift site
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) ?     0.055   12.3   0.0  cm        6       24 ~.          20           2 - ~. 1.00    5' 0.47
                                          ????? NC
                       ~~~~~<<__________>>>>>>> CS
          astro_FSE  1 <[5]*CCAGAAGACCAAGGGGCCC 24
                            :CAGAAGA CAAG: GCCC
 F10030.K000104.A11 20 <[0]*UCAGAAGAUCAAGAAGCCC 2
                       .....******************* PP

Targets

Predicted by TargetFinder


Predicted by TAPIR