The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. sRNA Atlas
  4. F1000
  5. B22184078

Accession: B22184078

Entry

ID: -
Alias: F1000.N000237.A11
Sequence: UUCAAGUCCCGUCGACUGCACCA
Description: tmRNA transfer-messenger RNA
Species: 仙茅  Species latin name: Curculigo orchioides
TCM Names: Xianmao(仙茅)  
TCM Resource (Sample number): 仙茅(1)
Evidence support:
Experimental status: Not yet
Database: sRNA Atlas

Homologs

miRBase Homologs

None

Bencao Homologs

B06955407; B22184078;

Rfam Alignments

>> tmRNA  transfer-messenger RNA
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0074   11.9   0.0  cm      332      354 ~]           1          23 + ~] 1.00    5' 0.57
                                        ????????????     NC
                          ~~~~~~~_______>>>>>]]]]]]]:::: CS
                tmRNA   1 <[331]*UUCGAuUCCCcCCAgCUCCACCa 354
                                 UUC+A UCCC  C  CU CACCA
    F1000.N000237.A11   1 <[  0]*UUCAAGUCCCGUCGACUGCACCA 23
                          .......*********************** PP

Targets

Predicted by TargetFinder


Predicted by TAPIR