The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR133
  5. zof-miR133q

Accession: B70966854

Entry

ID: zof-miR133q
Alias: F12642.N000079.A11
Sequence: UUUGGUCCCCUUCAACCAGCUGA
Description: mir-133 microRNA precursor family predicted,partially
Species: 姜  Species latin name: Zingiber officinale
TCM Name: Ganjiang(干姜)   Paojiang(炮姜)   Shengjiang(生姜)  
TCM Resource (Sample number): 干姜(1) 炮姜(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bswzz-miR133h; asc-miR133o; bca-miR133i; bpi-miR133aw; cci-miR133n; cde-miR133c; cfe-miR133s; cit-miR133co; cmd-miR133bh; cmi-miR133o; cof-miR133l; fsu-miR133g; hcr-miR133bf; ljp-miR133l; poe-miR133bi; pvl-miR133l; sch-miR133n; sdf-miR133i; sor-miR133cp; tch-miR133ba; tfa-miR133d; zof-miR133q;

Rfam Alignments

>> mir-133  mir-133 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   4.9e-05   24.5   0.0  cm       51       72 ~.           1          22 + ~. 1.00    5' 0.55
                              ??????     ?? ???????  NC
                        ~~~~~~>>>>>>----->>->>>>>>>- CS
             mir-133 14 <[37]*UuUGGUCCCCUUCAACCAGCuG 72
                              UUUGGUCCCCUUCAACCAGCUG
         zof-miR133q  1 <[ 0]*UUUGGUCCCCUUCAACCAGCUG 22
                        ......********************** PP

Targets

Predicted by TargetFinder

NM_001145153 ;   NM_001364885 ;   NM_025081 ;   NM_144649 ;  

Predicted by TAPIR

NM_001145153 ;   NM_001364885 ;   NM_018397 ;   NM_024791 ;   NM_025081 ;   NM_144649 ;