Entry

ID: vph-lin-4c
Alias: F18150.M000068.A11
Sequence: UCCUUGAGACCCUAACUUGUGA
Description: lin-4 microRNA precursor predicted,partially
Species: 紫花地丁 Species latin name: Viola philippica
TCM Name: Zihuadiding(紫花地丁)
TCM Resource (Sample number): 紫花地丁(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

sor-lin-4o; vph-lin-4c;

Rfam Alignments

>> lin-4  lin-4 microRNA precursor
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0071   18.6   0.0  cm        7       28 ~~           1          22 + ~~ 1.00 5'&3' 0.45
                               ??? ???? ??? ????????       NC
                         ~~~~~-<<<-<<<<-<<<-<<<<<<<<~~~~~~ CS
                lin-4  1 <[6]*UCCCUGAGACCccAAcuuGUGA*[43]> 71
                              UCC UGAGACCC AACUUGUGA
           vph-lin-4c  1 <[0]*UCCUUGAGACCCUAACUUGUGA*[ 0]> 22
                         .....**********************...... PP

Targets

Predicted by TargetFinder

NM_001009958 ; NM_001085366 ; NM_001085367 ; NM_017916 ; NM_024061 ;

Predicted by TAPIR

NM_001009958 ; NM_001085366 ; NM_001085367 ; NM_018676 ; NM_024061 ; NM_199263 ; NR_108100 ;

The Bencao (Herbal) Database（本草数据库）

Accession: B69810443