Entry

ID: rcr-miR159ao
Alias: F279.I000008.A11
Sequence: UGGAUUGAAGGGAGCUCC
Description: microRNA MIR159 predicted
Species: 大花红景天 Species latin name: Rhodiola crenulata
TCM Name: Hongjingtian(红景天)
TCM Resource (Sample number): 红景天(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

apl-miR159aq; gma-miR159aj; lpu-miR159ap; por-miR159ao; rcr-miR159ao;

Rfam Alignments

>> MIR159  microRNA MIR159
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0045   17.2   0.0  cm      166      183 ~~           1          18 + ~~ 1.00 5'&3' 0.56
                     ???????  ????????        NC
              ~~~~~~~>>>>>>>-->>>>>>>>:~~~~~~ CS
   MIR159   1 <[165]*UGGAcuGAAGGGAGCUCC*[13]> 196
                     UGGA UGAAGGGAGCUCC
rcr-miR159ao   1 <[  0]*UGGAUUGAAGGGAGCUCC*[ 0]> 18
              .......******************...... PP

Targets

Predicted by TargetFinder

NM_001002259 ; NM_001007176 ; NM_001010915 ; NM_001024455 ; NM_001025356 ; NM_001042762 ; NM_001080534 ; NM_001130420 ; NM_001134774 ; NM_001134775 ; NM_001134776 ; NM_001142678 ; NM_001142679 ; NM_001144994 ; NM_001164746 ; NM_001164747 ; NM_001164748 ; NM_001166347 ; NM_001166348 ; NM_001166349 ; NM_001167671 ; NM_001167672 ; NM_001170331 ; NM_001171740 ; NM_001171741 ; NM_001174071 ; NM_001174072 ; NM_001177948 ; NM_001177949 ; NM_001195272 ; NM_001204803 ; NM_001206856 ; NM_001218 ; NM_001242412 ; NM_001244580 ; NM_001256597 ; NM_001256598 ; NM_001256850 ; NM_001267550 ; NM_001267556 ; NM_001267558 ; NM_001267559 ; NM_001271634 ; NM_001278683 ; NM_001278685 ; NM_001284206 ; NM_001284207 ; NM_001286191 ; NM_001286192 ; NM_001286195 ; NM_001286196 ; NM_001286197 ; NM_001286198 ; NM_001287492 ; NM_001287493 ; NM_001287494 ; NM_001287495 ; NM_001287496 ; NM_001293642 ; NM_001300860 ; NM_001316350 ; NM_001318734 ; NM_001319842 ; NM_001319843 ; NM_001319844 ; NM_001319845 ; NM_001319846 ; NM_001321883 ; NM_001321903 ; NM_001321920 ; NM_001321922 ; NM_001321923 ; NM_001322033 ; NM_001329919 ; NM_001330288 ; NM_001346558 ; NM_001346559 ; NM_001346560 ; NM_001346561 ; NM_001346562 ; NM_001346563 ; NM_001346564 ; NM_001346565 ; NM_001362843 ; NM_001363943 ; NM_001370182 ; NM_001370183 ; NM_001370184 ; NM_001370185 ; NM_001370186 ; NM_001371476 ; NM_001429 ; NM_003075 ; NM_003319 ; NM_003496 ; NM_003861 ; NM_004924 ; NM_005185 ; NM_005444 ; NM_005445 ; NM_005544 ; NM_005578 ; NM_006456 ; NM_013232 ; NM_014236 ; NM_014829 ; NM_014906 ; NM_015603 ; NM_015710 ; NM_016201 ; NM_016210 ; NM_017521 ; NM_018039 ; NM_020447 ; NM_020731 ; NM_022116 ; NM_022822 ; NM_022895 ; NM_023925 ; NM_024923 ; NM_031912 ; NM_032156 ; NM_033400 ; NM_133378 ; NM_133432 ; NM_133437 ; NM_138694 ; NM_139067 ; NM_145811 ; NM_153029 ; NM_153694 ; NM_170724 ; NM_173626 ; NM_177938 ; NM_178276 ; NM_181519 ; NM_182919 ; NM_198511 ; NM_201286 ; NM_206925 ; NR_003682 ; NR_003713 ; NR_024872 ; NR_024873 ; NR_033963 ; NR_048561 ; NR_073390 ; NR_104409 ; NR_106898 ; NR_109833 ; NR_125341 ; NR_126060 ; NR_126061 ; NR_135511 ; NR_135841 ; NR_135842 ; NR_135843 ; NR_135844 ; NR_135845 ; NR_135846 ; NR_135847 ; NR_135848 ; NR_135849 ; NR_135850 ; NR_135851 ; NR_135852 ; NR_135853 ; NR_135854 ; NR_146604 ;

Predicted by TAPIR

NM_001001481 ; NM_001010915 ; NM_001011547 ; NM_001024216 ; NM_001025356 ; NM_001042762 ; NM_001100397 ; NM_001130420 ; NM_001142679 ; NM_001164748 ; NM_001166348 ; NM_001166349 ; NM_001170331 ; NM_001171740 ; NM_001172698 ; NM_001172699 ; NM_001174071 ; NM_001177948 ; NM_001177949 ; NM_001244580 ; NM_001256850 ; NM_001267550 ; NM_001271634 ; NM_001276418 ; NM_001282899 ; NM_001282900 ; NM_001282901 ; NM_001286192 ; NM_001286195 ; NM_001286196 ; NM_001286197 ; NM_001286198 ; NM_001287496 ; NM_001300860 ; NM_001300868 ; NM_001303618 ; NM_001303619 ; NM_001319035 ; NM_001321903 ; NM_001323412 ; NM_001323413 ; NM_001323415 ; NM_001323416 ; NM_001323418 ; NM_001346559 ; NM_001346565 ; NM_001362843 ; NM_001363943 ; NM_001370184 ; NM_001429 ; NM_002049 ; NM_002732 ; NM_003076 ; NM_003496 ; NM_003853 ; NM_004998 ; NM_005444 ; NM_006566 ; NM_007023 ; NM_007110 ; NM_014847 ; NM_017556 ; NM_018299 ; NM_021615 ; NM_022895 ; NM_031912 ; NM_033071 ; NM_033400 ; NM_133263 ; NM_133437 ; NM_133454 ; NM_139071 ; NM_170724 ; NM_173626 ; NM_176884 ; NM_176885 ; NM_177938 ; NM_178276 ; NM_181519 ; NM_182919 ; NM_182961 ; NM_201286 ; NM_206925 ; NR_003713 ; NR_015429 ; NR_024396 ; NR_024429 ; NR_024431 ; NR_073119 ; NR_073120 ; NR_073121 ; NR_073390 ; NR_104409 ; NR_109833 ; NR_125341 ; NR_126060 ; NR_126061 ; NR_135511 ; NR_146089 ; NR_157803 ; NR_157804 ;

The Bencao (Herbal) Database（本草数据库）

Accession: B56910262