Accession: B55996523

Entry
Homologs
Rfam Alignments
Targets

Entry

ID: pvl-lin-4f
Alias: F18150.M000043.A11
Sequence: UCCCUGAGGCCCUAACUUGUGA
Description: lin-4 microRNA precursor predicted,partially
Species: 夏枯草 Species latin name: Prunella vulgaris
TCM Name: Xiakucao(夏枯草)
TCM Resource (Sample number): 夏枯草(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

cit-lin-4l; pvl-lin-4f; sor-lin-4l;

Rfam Alignments

>> lin-4  lin-4 microRNA precursor
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0067   18.7   0.0  cm        7       28 ~~           1          22 + ~~ 1.00 5'&3' 0.55
                               ??? ???? ??? ????????       NC
                         ~~~~~-<<<-<<<<-<<<-<<<<<<<<~~~~~~ CS
                lin-4  1 <[6]*UCCCUGAGACCccAAcuuGUGA*[43]> 71
                              UCCCUGAG CCC AACUUGUGA
           sor-lin-4l  1 <[0]*UCCCUGAGGCCCUAACUUGUGA*[ 0]> 22
                         .....**********************...... PP

Targets

Predicted by TargetFinder

NM_001080527 ; NM_001164431 ; NM_153347 ;

Predicted by TAPIR

NM_001080527 ; NM_001164586 ; NM_153347 ; NR_108100 ;