The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR101
  5. pvl-miR101a

Accession: B55962786

Entry

ID: pvl-miR101a
Alias: F9858.N000079.A11
Sequence: GUACAGUACUGUGAUAACUGAAA
Description: mir-101 microRNA precursor family predicted,partially
Species: 夏枯草  Species latin name: Prunella vulgaris
TCM Name: Xiakucao(夏枯草)  
TCM Resource (Sample number): 夏枯草(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

acr-miR101a; asc-miR101a; bch-miR101a; bpi-miR101a; cfe-miR101a; cit-miR101a; cmd-miR101a; cmi-miR101c; fsu-miR101a; hcr-miR101a; lgr-miR101a; ljn-miR101a; mpu-miR101a; poe-miR101a; pvl-miR101a; sor-miR101a; vph-miR101a;

Rfam Alignments

>> mir-101  mir-101 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0077   18.7   0.0  cm       46       67 ~.           1          22 + ~. 1.00    5' 0.36
                                  ??????????????????  NC
                         ~~~~~~___>>>>>>>>>>>>>>>>>>- CS
              mir-101 10 <[36]*GUACaGuACugUGAUAACuGAA 67
                               GUACAGUACUGUGAUAACUGAA
          vph-miR101a  1 <[ 0]*GUACAGUACUGUGAUAACUGAA 22
                         ......********************** PP

Targets

Predicted by TargetFinder


Predicted by TAPIR

NM_001134778 ;   NM_001330782 ;   NM_001330782 ;   NM_006195 ;   NR_024122 ;   NR_024122 ;   NR_024123 ;   NR_024123 ;