The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR166
  5. pvl-miR166ao

Accession: B55740709

Entry

ID: pvl-miR166ao
Alias: F316.L000012.A3D
Sequence: UCGGACCAGGCUUCAUUCCCU
Description: MIR166 putative
Species: 夏枯草  Species latin name: Prunella vulgaris
TCM Name: Xiakucao(夏枯草)  
TCM Resource (Sample number): 夏枯草(2)
Predicted by Mirnovo: -
Evidence support: Mirbase|infernal
Experimental status: Not yet

Homologs

miRBase Homologs

cas-miR166e; csi-miR166f-3p; osa-miR166m;

Bencao Homologs

Bjl-miR166f; Bsr-miR166h; Bswzz-miR166b; aco-miR166b; aha-miR166i; ala-miR166k; aox-miR166g; apa-miR166g; apl-miR166i; asc-miR166g; ave-miR166h; bca-miR166f; bci-miR166c; bhi-miR166e; bmj-miR166e; car-miR166m; cba-miR166c; cci-miR166d; cco-miR166al; ccs-miR166ak; cde-miR166e; cid-miR166i; cit-miR166i; cja-miR166h; cmd-miR166g; cmj-miR166g; cof-miR166al; cso-miR166g; csp-miR166h; dst-miR166l; ehu-miR166h; eja-miR166f; epr-miR166ao; esn-miR166c; est-miR166k; fmu-miR166h; fsu-miR166i; gbi-miR166al; gja-miR166f; gma-miR166j; gmc-miR166j; gpe-miR166h; gsi-miR166g; hcr-miR166aq; hmu-miR166g; hof-miR166i; iba-miR166h; ili-miR166j; lba-miR166b; lfo-miR166h; lgr-miR166f; ljc-miR166i; lji-miR166g; ljp-miR166g; llc-miR166k; lpu-miR166aj; mal-miR166h; mca-miR166al; mch-miR166i; nnu-miR166ah; nte-miR166h; pav-miR166h; pcl-miR166j; pcn-miR166g; pfr-miR166ap; poe-miR166g; por-miR166j; ptn-miR166f; pvl-miR166ao; rch-miR166ah; rcr-miR166h; rja-miR166h; rte-miR166g; sar-miR166g; sba-miR166g; sbc-miR166j; sca-miR166c; sch-miR166l; sdf-miR166h; sdi-miR166g; sgl-miR166d; smi-miR166f; sor-miR166i; spo-miR166b; ssa-miR166g; ssu-miR166f; sto-miR166h; tci-miR166h; vof-miR166j;

Rfam Alignments

>> mir-166  mir-166 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00014   22.7   0.0  cm      101      120 ~.           1          20 + ~. 1.00    5' 0.60
                                                                ???  ??????  ??????? NC
                                                          ~~~~~~>>>-->>>>>>-->>>>>>> CS
                                              mir-166   7 <[94]*UCGGACCAGGCUUCAUUCCc 120
                                                                UCGGACCAGGCUUCAUUCCC
                                          vof-miR166j   1 <[ 0]*UCGGACCAGGCUUCAUUCCC 20
                                                          ......******************** PP

Targets

Predicted by TargetFinder

NM_000738 ;   NM_015221 ;   NM_017811 ;  

Predicted by TAPIR

NM_000738 ;   NM_015221 ;   NM_017811 ;