The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR8
  5. ppr-miR8c

Accession: B55100762

Entry

ID: ppr-miR8c
Alias: F4014.N000007.A11
Sequence: UAAUACUGCCUGGUAAUGAUGAU
Description: mir-8/mir-141/mir-200 microRNA precursor family predicted,partially
Species: 前胡  Species latin name: Peucedanum praeruptorum
TCM Name: Qianhu(前胡)  
TCM Resource (Sample number): 前胡(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR8c; cfe-miR8c; cmd-miR8d; poe-miR8c; ppr-miR8c; sdi-miR8c;

Rfam Alignments

>> mir-8  mir-8/mir-141/mir-200 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0014   20.9   0.0  cm       48       69 ~.           1          22 + ~. 1.00    5' 0.36
                               ?????????   ???? ????? NC
                         ~~~~~~>>>>>>>>>--->>>>->>>>> CS
                mir-8  9 <[39]*uAAcACUGcCUGGUAAuGAUGg 69
                               UAA ACUGCCUGGUAAUGAUG
            sdi-miR8c  1 <[ 0]*UAAUACUGCCUGGUAAUGAUGA 22
                         ......9********************* PP

Targets

Predicted by TargetFinder


Predicted by TAPIR