Entry

ID: ppr-miR159c
Alias: F279.I000001.A25
Sequence: UGGACUGAAGGGAGCUCC
Description: microRNA MIR159 predicted
Species: 前胡 Species latin name: Peucedanum praeruptorum
TCM Name: Qianhu(前胡)
TCM Resource (Sample number): 前胡(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

acr-miR159f; ala-miR159l; apl-miR159ap; asc-miR159d; bca-miR159i; bmj-miR159j; cco-miR159an; ccs-miR159al; cit-miR159g; clo-miR159d; cpi-miR159g; dst-miR159m; ehu-miR159g; epr-miR159e; est-miR159k; gma-miR159ai; gmc-miR159j; ini-miR159g; kga-miR159d; lpu-miR159ao; mca-miR159ak; nsc-miR159f; pav-miR159an; pfr-miR159j; pla-miR159d; por-miR159an; ppr-miR159c; psu-miR159aj; rcd-miR159c; rcr-miR159an; rja-miR159ao; sgl-miR159k; ssu-miR159h; twi-miR159j; vum-miR159f;

Rfam Alignments

>> MIR159  microRNA MIR159
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0037   17.6   0.0  cm      166      183 ~~           1          18 + ~~ 1.00 5'&3' 0.61
                                                                 ???????  ????????        NC
                                                          ~~~~~~~>>>>>>>-->>>>>>>>:~~~~~~ CS
                                               MIR159   1 <[165]*UGGAcuGAAGGGAGCUCC*[13]> 196
                                                                 UGGACUGAAGGGAGCUCC
                                          vum-miR159f   1 <[  0]*UGGACUGAAGGGAGCUCC*[ 0]> 18
                                                          .......******************...... PP

Targets

Predicted by TargetFinder

NM_000322 ; NM_000831 ; NM_000926 ; NM_001005407 ; NM_001009955 ; NM_001010915 ; NM_001040217 ; NM_001047160 ; NM_001077700 ; NM_001077701 ; NM_001077702 ; NM_001077703 ; NM_001077704 ; NM_001123364 ; NM_001134774 ; NM_001134775 ; NM_001134776 ; NM_001144994 ; NM_001145928 ; NM_001146110 ; NM_001146111 ; NM_001146112 ; NM_001146113 ; NM_001163258 ; NM_001163259 ; NM_001166347 ; NM_001166348 ; NM_001166349 ; NM_001171740 ; NM_001171741 ; NM_001172128 ; NM_001174071 ; NM_001174072 ; NM_001205206 ; NM_001205207 ; NM_001242826 ; NM_001243540 ; NM_001243541 ; NM_001253837 ; NM_001256850 ; NM_001267550 ; NM_001267556 ; NM_001267558 ; NM_001267559 ; NM_001267843 ; NM_001276418 ; NM_001278511 ; NM_001278512 ; NM_001278683 ; NM_001278685 ; NM_001282405 ; NM_001284292 ; NM_001284293 ; NM_001286191 ; NM_001286192 ; NM_001286195 ; NM_001286196 ; NM_001286197 ; NM_001286198 ; NM_001300860 ; NM_001304813 ; NM_001304814 ; NM_001305008 ; NM_001305009 ; NM_001305010 ; NM_001305011 ; NM_001306089 ; NM_001306146 ; NM_001309426 ; NM_001309427 ; NM_001318734 ; NM_001318894 ; NM_001319998 ; NM_001320766 ; NM_001321216 ; NM_001321378 ; NM_001321380 ; NM_001321478 ; NM_001321480 ; NM_001321883 ; NM_001321903 ; NM_001321920 ; NM_001321922 ; NM_001321923 ; NM_001323972 ; NM_001323973 ; NM_001323974 ; NM_001323975 ; NM_001330221 ; NM_001330299 ; NM_001330300 ; NM_001330301 ; NM_001330302 ; NM_001330303 ; NM_001348441 ; NM_001350530 ; NM_001351089 ; NM_001351090 ; NM_001351091 ; NM_001351092 ; NM_001351533 ; NM_001352510 ; NM_001352511 ; NM_001352512 ; NM_001352684 ; NM_001352685 ; NM_001352686 ; NM_001354594 ; NM_001354595 ; NM_001362843 ; NM_001363943 ; NM_001364689 ; NM_001364690 ; NM_001365891 ; NM_001429 ; NM_002112 ; NM_002645 ; NM_003076 ; NM_003319 ; NM_003594 ; NM_003853 ; NM_004513 ; NM_004594 ; NM_004644 ; NM_004898 ; NM_005165 ; NM_005445 ; NM_005785 ; NM_005863 ; NM_007345 ; NM_012118 ; NM_012152 ; NM_012465 ; NM_013232 ; NM_014829 ; NM_014866 ; NM_014906 ; NM_014979 ; NM_015322 ; NM_015565 ; NM_015603 ; NM_016112 ; NM_016183 ; NM_016201 ; NM_016210 ; NM_016337 ; NM_016953 ; NM_017520 ; NM_017742 ; NM_017931 ; NM_018070 ; NM_018379 ; NM_018717 ; NM_020447 ; NM_020948 ; NM_021098 ; NM_022465 ; NM_022822 ; NM_022895 ; NM_024545 ; NM_024923 ; NM_030650 ; NM_030759 ; NM_032314 ; NM_032376 ; NM_032970 ; NM_033208 ; NM_133378 ; NM_133432 ; NM_133437 ; NM_139071 ; NM_145716 ; NM_152680 ; NM_172217 ; NM_173626 ; NM_173808 ; NM_175741 ; NM_178276 ; NM_178448 ; NM_194255 ; NM_194358 ; NM_194359 ; NM_198795 ; NM_199242 ; NM_201286 ; NM_206839 ; NR_003682 ; NR_003713 ; NR_024153 ; NR_024628 ; NR_024629 ; NR_027708 ; NR_027709 ; NR_040053 ; NR_048561 ; NR_073040 ; NR_073404 ; NR_104409 ; NR_125341 ; NR_126060 ; NR_126061 ; NR_126534 ; NR_130941 ; NR_135659 ; NR_135661 ; NR_135841 ; NR_135842 ; NR_135843 ; NR_135844 ; NR_135845 ; NR_135846 ; NR_135847 ; NR_135848 ; NR_135849 ; NR_135850 ; NR_135851 ; NR_135852 ; NR_135853 ; NR_135854 ; NR_136664 ; NR_136665 ; NR_136666 ; NR_145770 ; NR_148035 ; NR_148920 ; NR_157803 ; NR_157804 ;

Predicted by TAPIR

NM_000059 ; NM_000636 ; NM_000926 ; NM_001005407 ; NM_001009955 ; NM_001010915 ; NM_001024215 ; NM_001024216 ; NM_001040217 ; NM_001047160 ; NM_001077416 ; NM_001077418 ; NM_001077700 ; NM_001077701 ; NM_001077703 ; NM_001077704 ; NM_001110556 ; NM_001134774 ; NM_001134775 ; NM_001134776 ; NM_001135733 ; NM_001136469 ; NM_001137664 ; NM_001143984 ; NM_001145815 ; NM_001146110 ; NM_001146111 ; NM_001146112 ; NM_001146113 ; NM_001163258 ; NM_001163259 ; NM_001166347 ; NM_001166348 ; NM_001166349 ; NM_001171740 ; NM_001171741 ; NM_001172128 ; NM_001174071 ; NM_001174072 ; NM_001205206 ; NM_001205207 ; NM_001243540 ; NM_001243541 ; NM_001253837 ; NM_001256850 ; NM_001267550 ; NM_001276418 ; NM_001278683 ; NM_001278685 ; NM_001282405 ; NM_001282683 ; NM_001284292 ; NM_001284293 ; NM_001286191 ; NM_001286192 ; NM_001286195 ; NM_001286196 ; NM_001286197 ; NM_001286198 ; NM_001286565 ; NM_001286566 ; NM_001290185 ; NM_001291285 ; NM_001291303 ; NM_001300860 ; NM_001300868 ; NM_001300869 ; NM_001305008 ; NM_001305009 ; NM_001305010 ; NM_001305011 ; NM_001309426 ; NM_001309427 ; NM_001318734 ; NM_001318859 ; NM_001318860 ; NM_001318861 ; NM_001318862 ; NM_001318863 ; NM_001318894 ; NM_001319035 ; NM_001319998 ; NM_001320766 ; NM_001321216 ; NM_001321883 ; NM_001321903 ; NM_001330221 ; NM_001330449 ; NM_001350151 ; NM_001350530 ; NM_001351089 ; NM_001351090 ; NM_001351091 ; NM_001351092 ; NM_001351533 ; NM_001352510 ; NM_001352511 ; NM_001352512 ; NM_001352684 ; NM_001352685 ; NM_001352686 ; NM_001360235 ; NM_001360236 ; NM_001362843 ; NM_001363540 ; NM_001363943 ; NM_001364689 ; NM_001364690 ; NM_001365891 ; NM_001367846 ; NM_001371328 ; NM_001371534 ; NM_001371536 ; NM_001429 ; NM_001456 ; NM_001532 ; NM_002440 ; NM_002732 ; NM_003076 ; NM_003319 ; NM_003594 ; NM_003853 ; NM_004480 ; NM_004513 ; NM_005165 ; NM_005863 ; NM_007110 ; NM_012152 ; NM_012401 ; NM_012465 ; NM_014705 ; NM_014732 ; NM_014829 ; NM_014866 ; NM_014876 ; NM_014906 ; NM_014979 ; NM_015322 ; NM_015565 ; NM_015603 ; NM_015944 ; NM_016112 ; NM_016201 ; NM_016210 ; NM_016238 ; NM_016337 ; NM_016953 ; NM_017520 ; NM_017556 ; NM_017742 ; NM_018070 ; NM_018379 ; NM_018717 ; NM_020171 ; NM_020202 ; NM_020948 ; NM_021098 ; NM_021729 ; NM_022465 ; NM_022781 ; NM_022822 ; NM_022895 ; NM_023943 ; NM_024582 ; NM_024630 ; NM_024735 ; NM_024923 ; NM_030650 ; NM_030759 ; NM_032314 ; NM_032862 ; NM_032970 ; NM_033071 ; NM_033208 ; NM_033223 ; NM_033285 ; NM_080916 ; NM_080918 ; NM_133378 ; NM_133432 ; NM_133437 ; NM_139071 ; NM_145716 ; NM_152556 ; NM_152599 ; NM_152680 ; NM_172217 ; NM_173626 ; NM_175732 ; NM_175741 ; NM_177531 ; NM_178155 ; NM_178156 ; NM_178276 ; NM_178448 ; NM_182961 ; NM_194255 ; NM_194293 ; NM_194328 ; NM_194329 ; NM_194330 ; NM_194332 ; NM_198795 ; NM_199242 ; NM_201286 ; NR_003561 ; NR_003682 ; NR_015429 ; NR_024042 ; NR_024153 ; NR_024396 ; NR_024429 ; NR_024431 ; NR_024628 ; NR_024629 ; NR_026897 ; NR_027708 ; NR_027709 ; NR_027768 ; NR_029401 ; NR_033908 ; NR_038167 ; NR_048561 ; NR_073040 ; NR_073404 ; NR_074083 ; NR_104409 ; NR_105002 ; NR_110763 ; NR_125341 ; NR_125343 ; NR_126060 ; NR_126061 ; NR_126534 ; NR_130941 ; NR_132119 ; NR_134893 ; NR_134894 ; NR_134895 ; NR_134896 ; NR_134897 ; NR_134898 ; NR_135112 ; NR_145770 ; NR_148035 ; NR_157803 ; NR_157804 ; NR_158193 ;

The Bencao (Herbal) Database（本草数据库）

Accession: B54961856