The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR146
  5. ppr-miR146h

Accession: B55136535

Entry

ID: ppr-miR146h
Alias: F13220.N000076.A25
Sequence: UGAGAACUGAAUUCCAUGGGUUA
Description: microRNA mir-146 predicted
Species: 前胡  Species latin name: Peucedanum praeruptorum
TCM Name: Qianhu(前胡)  
TCM Resource (Sample number): 前胡(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR146o; cas-miR146f; cfe-miR146p; cit-miR146o; cmd-miR146p; hcr-miR146g; pfr-miR146g; poe-miR146m; ppr-miR146h; sor-miR146m; tki-miR146h;

Rfam Alignments

>> mir-146  microRNA mir-146
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !     0.001   21.7   0.0  cm       16       38 ~~           1          23 + ~~ 1.00 5'&3' 0.39
                                                               ????????       ????         NC
                                                       ~~~~~~--<<<<<<<<-------<<<<__~~~~~~ CS
                                            mir-146  1 <[15]*UGAGAACUGAAUUCCAUgGgcUG*[52]> 90
                                                             UGAGAACUGAAUUCCAUGGG U
                                        tki-miR146h  1 <[ 0]*UGAGAACUGAAUUCCAUGGGUUA*[ 0]> 23
                                                       ......***********************...... PP

Targets

Predicted by TargetFinder

NM_001198950 ;   NM_001286526 ;   NM_015011 ;  

Predicted by TAPIR