The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR26
  5. pfr-miR26e

Accession: B52714049

Entry

ID: pfr-miR26e
Alias: F2227.N000128.A25
Sequence: UUCAAGUAAUCCAGGAUAGGCUU
Description: mir-26 microRNA precursor family predicted,partially
Species: 紫苏  Species latin name: Perilla frutescens
TCM Name: Zisuzi(紫苏子)   Zisuye(紫苏叶)   Zisugeng(紫苏梗)  
TCM Resource (Sample number): 紫苏子(1) 紫苏(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR26av; acr-miR26d; asc-miR26d; bca-miR26am; bch-miR26d; bhi-miR26c; bpi-miR26d; cci-miR26d; cfe-miR26j; cit-miR26ax; cmd-miR26aq; cmi-miR26b; csu-miR26d; esn-miR26e; fsu-miR26c; gel-miR26e; hcr-miR26am; ljo-miR26c; ljp-miR26d; pfr-miR26e; poe-miR26an; ppr-miR26g; psu-miR26c; pvl-miR26e; sar-miR26c; sbc-miR26b; sch-miR26c; sdf-miR26d; sgi-miR26g; sor-miR26ar; tch-miR26g; tki-miR26e; vph-miR26d; zof-miR26h;

Rfam Alignments

>> mir-26  mir-26 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00077   20.9   0.0  cm        9       31 ~~           1          23 + ~~ 1.00 5'&3' 0.39
                                                             ????????? ?????????         NC
                                                      ~~~~~::<<<<<<<<<-<<<<<<<<<__~~~~~~ CS
                                            mir-26  1 <[8]*UUCAAGUAAucCAGgAuAGGCUG*[43]> 74
                                                           UUCAAGUAAUCCAGGAUAGGCU
                                        zof-miR26h  1 <[0]*UUCAAGUAAUCCAGGAUAGGCUU*[ 0]> 23
                                                      .....**********************9...... PP

Targets

Predicted by TargetFinder

NM_014314 ;  

Predicted by TAPIR