The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR126
  5. pfr-miR126d

Accession: B52928525

Entry

ID: pfr-miR126d
Alias: F43969.M000046.A25*
Sequence: UCGUACCGUGAGUAAUAAUGCA
Description: microRNA mir-126 predicted
Species: 紫苏  Species latin name: Perilla frutescens
TCM Name: Zisuzi(紫苏子)   Zisuye(紫苏叶)   Zisugeng(紫苏梗)  
TCM Resource (Sample number): 紫苏子(1) 紫苏(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR126h; acr-miR126c; asc-miR126f; bca-miR126e; bch-miR126f; bhi-miR126c; car-miR126b; cba-miR126c; cci-miR126c; cfe-miR126f; cit-miR126l; cmd-miR126h; cof-miR126c; csp-miR126b; epr-miR126c; esn-miR126c; fmu-miR126c; fsu-miR126c; gel-miR126c; hcr-miR126h; lji-miR126c; ljo-miR126c; ljp-miR126c; llu-miR126c; mal-miR126c; pfr-miR126d; poe-miR126i; ppr-miR126e; psu-miR126c; pvl-miR126d; sar-miR126c; sch-miR126c; sdf-miR126c; sgi-miR126e; sln-miR126c; sor-miR126k; tch-miR126d; tki-miR126d; vph-miR126f; zof-miR126f;

Rfam Alignments

>> mir-126  microRNA mir-126
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0065   19.0   0.0  cm       46       67 ~~           1          22 + ~~ 1.00 5'&3' 0.41
                                                             ??????? ???????????        NC
                                                      ~~~~~~->>>>>>>->>>>>>>>>>>::~~~~~ CS
                                           mir-126  1 <[45]*UCGUACCgUgAGUAAUAAUGCg*[6]> 73
                                                            UCGUACCGUGAGUAAUAAUGC+
                                       zof-miR126f  1 <[ 0]*UCGUACCGUGAGUAAUAAUGCA*[0]> 22
                                                      ......**********************..... PP

Targets

Predicted by TargetFinder


Predicted by TAPIR