The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR146
  5. pfr-miR146e

Accession: B52834839

Entry

ID: pfr-miR146e
Alias: F9241.O000060.A25
Sequence: UGAGAACUGAAUUCCAUAGGCUGU
Description: microRNA mir-146 predicted
Species: 紫苏  Species latin name: Perilla frutescens
TCM Name: Zisuzi(紫苏子)   Zisuye(紫苏叶)   Zisugeng(紫苏梗)  
TCM Resource (Sample number): 紫苏子(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR146l; asc-miR146f; bch-miR146c; bhi-miR146e; cas-miR146d; cfe-miR146m; cit-miR146l; cmd-miR146m; cof-miR146e; ehu-miR146a; hcr-miR146e; pfr-miR146e; poe-miR146j; ppr-miR146f; sch-miR146; sdf-miR146a; sgi-miR146e; sor-miR146k; tch-miR146b; tki-miR146f; vph-miR146b;

Rfam Alignments

>> mir-146  microRNA mir-146
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0002   24.3   0.0  cm       16       39 ~~           1          24 + ~~ 1.00 5'&3' 0.42
                                                                 ????????       ????          NC
                                                         ~~~~~~--<<<<<<<<-------<<<<___~~~~~~ CS
                                              mir-146  1 <[15]*UGAGAACUGAAUUCCAUgGgcUGU*[51]> 90
                                                               UGAGAACUGAAUUCCAU GGCUGU
                                          vph-miR146b  1 <[ 0]*UGAGAACUGAAUUCCAUAGGCUGU*[ 0]> 24
                                                         ......***********************9...... PP

Targets

Predicted by TargetFinder


Predicted by TAPIR

NM_004391 ;   NM_004391 ;