The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR146
  5. pfr-miR146d

Accession: B52834838

Entry

ID: pfr-miR146d
Alias: F9241.N000043.A25
Sequence: UGAGAACUGAAUUCCAUGGGUUU
Description: microRNA mir-146 predicted
Species: 紫苏  Species latin name: Perilla frutescens
TCM Name: Zisuzi(紫苏子)   Zisuye(紫苏叶)   Zisugeng(紫苏梗)  
TCM Resource (Sample number): 紫苏子(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR146j; acr-miR146; asc-miR146e; bca-miR146g; bhi-miR146c; cas-miR146c; cfe-miR146k; cit-miR146j; cmd-miR146j; cya-miR146a; esn-miR146a; fmu-miR146c; hcr-miR146d; pfr-miR146d; poe-miR146i; sca-miR146a; sgi-miR146d; sor-miR146i; tki-miR146e;

Rfam Alignments

>> mir-146  microRNA mir-146
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !     0.001   21.7   0.0  cm       16       38 ~~           1          23 + ~~ 1.00 5'&3' 0.39
                                                               ????????       ????         NC
                                                       ~~~~~~--<<<<<<<<-------<<<<__~~~~~~ CS
                                            mir-146  1 <[15]*UGAGAACUGAAUUCCAUgGgcUG*[52]> 90
                                                             UGAGAACUGAAUUCCAUGGG U
                                        tki-miR146e  1 <[ 0]*UGAGAACUGAAUUCCAUGGGUUU*[ 0]> 23
                                                       ......**********************9...... PP

Targets

Predicted by TargetFinder

NM_001354045 ;   NM_207363 ;  

Predicted by TAPIR

NM_001185039 ;   NM_004035 ;   NM_007292 ;   NM_207363 ;