Entry

ID: pav-miR159ar
Alias: F1317.J000013.A11
Sequence: UUGGAUUGAAGGGAGCUCG
Description: microRNA MIR159 predicted
Species: 萹蓄 Species latin name: Polygonum aviculare
TCM Name: Bianxu(萹蓄)
TCM Resource (Sample number): 萹蓄(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

apl-miR159ax; ave-miR159k; gma-miR159aq; llc-miR159i; lpu-miR159bd; mca-miR159ap; pav-miR159ar; pfr-miR159l; por-miR159av; rja-miR159au;

Rfam Alignments

>> MIR159  microRNA MIR159
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0033   17.9   0.0  cm      165      182 ~.           1          18 + ~. 1.00    5' 0.50
                                  ???????  ???????? NC
                          ~~~~~~~->>>>>>>-->>>>>>>> CS
               MIR159  13 <[152]*UUGGAcuGAAGGGAGCUC 182
                                 UUGGA UGAAGGGAGCUC
         rja-miR159au   1 <[  0]*UUGGAUUGAAGGGAGCUC 18
                          .......****************** PP

Targets

Predicted by TargetFinder

NM_000476 ; NM_001024455 ; NM_001031684 ; NM_001047160 ; NM_001134774 ; NM_001134775 ; NM_001134776 ; NM_001167671 ; NM_001167672 ; NM_001184773 ; NM_001184774 ; NM_001184775 ; NM_001184776 ; NM_001184777 ; NM_001195272 ; NM_001195446 ; NM_001242412 ; NM_001256850 ; NM_001267550 ; NM_001267556 ; NM_001267558 ; NM_001267559 ; NM_001271634 ; NM_001288824 ; NM_001288825 ; NM_001288826 ; NM_001288827 ; NM_001288828 ; NM_001318121 ; NM_001318122 ; NM_001318734 ; NM_001321265 ; NM_001321266 ; NM_001321267 ; NM_001363802 ; NM_001368133 ; NM_003319 ; NM_005260 ; NM_005288 ; NM_005444 ; NM_005578 ; NM_005863 ; NM_013232 ; NM_018383 ; NM_020731 ; NM_021115 ; NM_022822 ; NM_031889 ; NM_033400 ; NM_133378 ; NM_133432 ; NM_133437 ; NM_138694 ; NM_138799 ; NM_170724 ; NR_003713 ; NR_024872 ; NR_024873 ; NR_073040 ; NR_073390 ; NR_109833 ; NR_135598 ; NR_135599 ; NR_135600 ; NR_135603 ; NR_135604 ; NR_135605 ;

Predicted by TAPIR

NM_000476 ; NM_001004434 ; NM_001024455 ; NM_001025356 ; NM_001031684 ; NM_001047160 ; NM_001134774 ; NM_001134775 ; NM_001134776 ; NM_001142678 ; NM_001142679 ; NM_001184773 ; NM_001184774 ; NM_001184775 ; NM_001184776 ; NM_001184777 ; NM_001195272 ; NM_001195446 ; NM_001204803 ; NM_001218 ; NM_001242412 ; NM_001256850 ; NM_001267550 ; NM_001267556 ; NM_001267558 ; NM_001267559 ; NM_001271634 ; NM_001293642 ; NM_001300860 ; NM_001318121 ; NM_001318122 ; NM_001318734 ; NM_001363802 ; NM_001370182 ; NM_001370183 ; NM_001370184 ; NM_001370185 ; NM_001370186 ; NM_003319 ; NM_004686 ; NM_005444 ; NM_005863 ; NM_013232 ; NM_014829 ; NM_018383 ; NM_020731 ; NM_021115 ; NM_022822 ; NM_031912 ; NM_032513 ; NM_133378 ; NM_133432 ; NM_133437 ; NM_138694 ; NM_170724 ; NM_181519 ; NM_206925 ; NR_003713 ; NR_073040 ; NR_073390 ; NR_109833 ; NR_125341 ; NR_135511 ; NR_146089 ;

The Bencao (Herbal) Database（本草数据库）

Accession: B50569018