The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR92
  5. poe-miR92i

Accession: B54201942

Entry

ID: poe-miR92i
Alias: F46385.L000121.A25
Sequence: UAUUGCACUUGUCCCGGCCUG
Description: mir-92 microRNA precursor family predicted,partially
Species: 马齿苋  Species latin name: Portulaca oleracea
TCM Name: Machixian(马齿苋)  
TCM Resource (Sample number): 马齿苋(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR92o; acr-miR92c; asc-miR92d; bhi-miR92f; cfe-miR92g; cit-miR92aq; cmd-miR92h; cof-miR92d; csp-miR92c; csu-miR92e; fsu-miR92e; hcr-miR92g; mpu-miR92d; poe-miR92i; pvl-miR92f; sor-miR92p;

Rfam Alignments

>> mir-92  mir-92 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0011   19.3   0.0  cm       50       70 ~~           1          21 + ~~ 1.00 5'&3' 0.57
                                                                   ????????? ????? ?????       NC
                                                             ~~~~~~>>>>>>>>>->>>>>->>>>>~~~~~~ CS
                                                   mir-92  1 <[49]*uAuUGCACuUgUCCCGGCCug*[10]> 80
                                                                   UAUUGCACUUGUCCCGGCCUG
                                               sor-miR92p  1 <[ 0]*UAUUGCACUUGUCCCGGCCUG*[ 0]> 21
                                                             ......*********************...... PP

Targets

Predicted by TargetFinder

NM_015629 ;   NM_018989 ;   NR_135541 ;   NR_135542 ;   NR_135543 ;   NR_135544 ;  

Predicted by TAPIR

NM_018989 ;   NM_173829 ;   NR_135541 ;   NR_135542 ;   NR_135543 ;   NR_135544 ;