The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR7
  5. poe-miR7g

Accession: B54227745

Entry

ID: poe-miR7g
Alias: F98069.N000071.A11
Sequence: UGGAAGACUAGUGAUUUUGUUGC
Description: mir-7 microRNA precursor predicted,partially
Species: 马齿苋  Species latin name: Portulaca oleracea
TCM Name: Machixian(马齿苋)  
TCM Resource (Sample number): 马齿苋(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR7k; bca-miR7f; cfe-miR7g; cmd-miR7i; cof-miR7e; poe-miR7g;

Rfam Alignments

>> mir-7  mir-7 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0018   21.7   0.0  cm       15       37 ~~           1          23 + ~~ 1.00 5'&3' 0.39
                                ??       ????? ???????       NC
                         ~~~~~~-<<-------<<<<<-<<<<<<<~~~~~~ CS
                mir-7  1 <[14]*UGGAAGACUAGuGAuUUUgUUGU*[51]> 88
                               UGGAAGACUAGUGAUUUUGUUG
            poe-miR7g  1 <[ 0]*UGGAAGACUAGUGAUUUUGUUGC*[ 0]> 23
                         ......***********************...... PP

Targets

Predicted by TargetFinder

NM_001005353 ;   NM_001330616 ;   NM_013410 ;   NM_203464 ;   NR_039867 ;  

Predicted by TAPIR

NM_001005353 ;   NM_001244766 ;   NM_001330616 ;   NM_013410 ;   NM_173468 ;   NM_203464 ;   NR_039867 ;