The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR7
  5. poe-miR7b

Accession: B54039085

Entry

ID: poe-miR7b
Alias: F1939.O001767.A11
Sequence: UGGAGGACUAGUGAUUUUGUUGUU
Description: mir-7 microRNA precursor predicted,partially
Species: 马齿苋  Species latin name: Portulaca oleracea
TCM Name: Machixian(马齿苋)  
TCM Resource (Sample number): 马齿苋(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR7d; poe-miR7b; tki-miR7d;

Rfam Alignments

>> mir-7  mir-7 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0034   20.8   0.0  cm       15       38 ~~           1          24 + ~~ 1.00 5'&3' 0.38
                                ??       ????? ????????       NC
                         ~~~~~~-<<-------<<<<<-<<<<<<<<~~~~~~ CS
                mir-7  1 <[14]*UGGAAGACUAGuGAuUUUgUUGUu*[50]> 88
                               UGGA GACUAGUGAUUUUGUUGUU
            tki-miR7d  1 <[ 0]*UGGAGGACUAGUGAUUUUGUUGUU*[ 0]> 24
                         ......************************...... PP

Targets

Predicted by TargetFinder

NR_039867 ;  

Predicted by TAPIR

NM_001286771 ;   NM_001330261 ;   NM_003204 ;   NM_015574 ;   NM_032217 ;   NM_198889 ;   NR_039867 ;