The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR30
  5. poe-miR30bs

Accession: B54079700

Entry

ID: poe-miR30bs
Alias: F3769.O000209.A11
Sequence: UGUAAACAUCCUCGACUGGAAGCC
Description: mir-30 microRNA precursor predicted,partially
Species: 马齿苋  Species latin name: Portulaca oleracea
TCM Name: Machixian(马齿苋)  
TCM Resource (Sample number): 马齿苋(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR30ax; acr-miR30k; asc-miR30ap; bca-miR30ak; bhi-miR30ai; cci-miR30an; cfe-miR30ap; cit-miR30db; cmd-miR30bf; cso-miR30d; csp-miR30k; fmu-miR30ak; hcr-miR30ax; ljp-miR30al; poe-miR30bs; ppr-miR30am; sdf-miR30n; sgi-miR30ak; sor-miR30cx; tki-miR30ap; zof-miR30ar;

Rfam Alignments

>> mir-30  mir-30 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   8.1e-05   27.5   0.0  cm        1       24 [~           1          24 + [~ 1.00    3' 0.50
                         ??????????  ???????????       NC
                        :<<<<<<<<<<--<<<<<<<<<<<~~~~~~ CS
              mir-30  1 UGuAAACAUCcUcGACuGgaAGCu*[36]> 60
                        UGUAAACAUCCUCGACUGGAAGC
         zof-miR30ar  1 UGUAAACAUCCUCGACUGGAAGCC*[ 0]> 24
                        ************************...... PP

Targets

Predicted by TargetFinder


Predicted by TAPIR