Entry

ID: poe-miR30ab
Alias: F3769.J000007.A11
Sequence: UGUAAACAUCCUCGACUGG
Description: mir-30 microRNA precursor predicted,partially
Species: 马齿苋 Species latin name: Portulaca oleracea
TCM Name: Machixian(马齿苋)
TCM Resource (Sample number): 马齿苋(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR30ac; asc-miR30aa; bch-miR30ab; bpi-miR30a; cfe-miR30ab; cit-miR30ae; cmd-miR30ac; csp-miR30a; hcr-miR30ab; poe-miR30ab; ppr-miR30ab; sdf-miR30a; sgi-miR30aa; sor-miR30af; tki-miR30ab; vph-miR30aa;

Rfam Alignments

>> mir-30  mir-30 microRNA precursor
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0022   21.8   0.0  cm        1       19 [~           1          19 + [~ 1.00    3' 0.47
              ??????????  ??????       NC
             :<<<<<<<<<<--<<<<<<~~~~~~ CS
   mir-30  1 UGuAAACAUCcUcGACuGg*[41]> 60
             UGUAAACAUCCUCGACUGG
vph-miR30aa  1 UGUAAACAUCCUCGACUGG*[ 0]> 19
             *******************...... PP

Targets

Predicted by TargetFinder

NM_001271815 ; NM_001288973 ; NM_001322253 ; NM_001322256 ; NM_001322257 ; NM_001351610 ; NM_001351611 ; NM_001351612 ; NM_001351613 ; NM_001351614 ; NM_001351615 ; NM_001351616 ; NM_001351617 ; NM_001351618 ; NM_001351619 ; NM_001351620 ; NM_001351632 ; NM_003474 ; NM_007052 ; NM_007195 ; NM_013955 ; NM_015106 ; NM_032832 ; NM_178505 ; NR_003024 ; NR_034130 ; NR_110241 ; NR_134507 ;

Predicted by TAPIR

NM_001145901 ; NM_001318374 ; NM_001322253 ; NM_001322256 ; NM_001322257 ; NM_001369201 ; NM_015106 ; NM_019067 ; NR_029846 ; NR_134507 ; NR_135557 ;

The Bencao (Herbal) Database（本草数据库）

Accession: B54079638