The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR26
  5. poe-miR26ad

Accession: B54048803

Entry

ID: poe-miR26ad
Alias: F2227.M000038.A25
Sequence: UUCAAGUAAUCCAGGAUAGGUU
Description: mir-26 microRNA precursor family predicted,partially
Species: 马齿苋  Species latin name: Portulaca oleracea
TCM Name: Machixian(马齿苋)  
TCM Resource (Sample number): 马齿苋(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR26ad; bca-miR26ad; cfe-miR26d; cit-miR26ae; cmd-miR26ad; fsu-miR26b; gel-miR26d; hcr-miR26ad; ljn-miR26b; ljo-miR26b; mal-miR26d; pfr-miR26d; poe-miR26ad; pvl-miR26b; sor-miR26ad; zof-miR26d;

Rfam Alignments

>> mir-26  mir-26 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00086   20.6   0.0  cm        9       30 ~~           1          22 + ~~ 1.00 5'&3' 0.36
                                                                 ????????? ?????????        NC
                                                          ~~~~~::<<<<<<<<<-<<<<<<<<<_~~~~~~ CS
                                                mir-26  1 <[8]*UUCAAGUAAucCAGgAuAGGCU*[44]> 74
                                                               UUCAAGUAAUCCAGGAUAGG U
                                            zof-miR26d  1 <[0]*UUCAAGUAAUCCAGGAUAGGUU*[ 0]> 22
                                                          .....**********************...... PP

Targets

Predicted by TargetFinder

NM_001144769 ;   NM_001144770 ;   NM_014314 ;   NM_015548 ;   NM_183380 ;  

Predicted by TAPIR

NM_001144769 ;   NM_001144770 ;   NM_015548 ;   NM_183380 ;