The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR159
  5. sto-miR159al

Accession: B65414077

Entry

ID: sto-miR159al
Alias: F931.L001910.A11
Sequence: UUUGGACUGAAGGGAGCUCCA
Description: microRNA MIR159 predicted
Species: 决明  Species latin name: Senna tora
TCM Name:
TCM Resource (Sample number): 决明子(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

aha-miR159m; cco-miR159ay; gma-miR159ao; sto-miR159al;

Rfam Alignments

>> MIR159  microRNA MIR159
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0011   20.0   0.0  cm      164      183 ~.           1          20 + ~. 1.00    5' 0.55
                                   ???????  ????????  NC
                          ~~~~~~~-->>>>>>>-->>>>>>>>: CS
               MIR159  13 <[151]*uUUGGAcuGAAGGGAGCUCC 183
                                 UUUGGACUGAAGGGAGCUCC
         sto-miR159al   1 <[  0]*UUUGGACUGAAGGGAGCUCC 20
                          .......******************** PP

Targets

Predicted by TargetFinder

NM_001001852 ;   NM_001010915 ;   NM_001047160 ;   NM_001166269 ;   NM_001166270 ;   NM_001300860 ;   NM_001321883 ;   NM_001321903 ;   NM_005445 ;   NM_005863 ;   NM_014829 ;   NM_014906 ;   NM_017815 ;   NM_019071 ;   NR_003682 ;   NR_048561 ;   NR_073040 ;   NR_125341 ;  

Predicted by TAPIR

NM_001001852 ;   NM_001010915 ;   NM_001166269 ;   NM_001166270 ;   NM_001300860 ;   NM_001321883 ;   NM_001321903 ;   NM_001362843 ;   NM_001429 ;   NM_014829 ;   NM_017815 ;   NR_125341 ;