The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR156
  5. sto-miR156d

Accession: B65369502

Entry

ID: sto-miR156d
Alias: F390.L000106.A3D*
Sequence: UGACAGAAGAGAGUGAGCACA
Description: MIR156 putative
Species: 决明  Species latin name: Senna tora
TCM Name:
TCM Resource (Sample number): 决明子(1)
Predicted by Mirnovo: -
Evidence support: Mirbase
Experimental status: Not yet

Homologs

miRBase Homologs

bna-miR156a; hvu-miR156a; hvu-miR156b; rco-miR156a; rco-miR156b; rco-miR156c; rco-miR156d; ssl-miR156; ssp-miR156; tae-miR156;

Bencao Homologs

Bjl-miR156b; apl-miR156b; gsi-miR156; por-miR156c; sch-miR156e; sto-miR156d;

Rfam Alignments

>> mir-156  mir-156 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) ?     0.035   17.0   0.0  cm        2       22 ~~           1          21 + ~~ 1.00 5'&3' 0.48
                                                              ????????????????????        NC
                                                         ~~~~~<<<<<<<<<<<<<<<<<<<<-~~~~~~ CS
                                              mir-156  1 <[1]*uGACaGaaGAGaGUGAGCACA*[66]> 88
                                                              UGACAGAAGAGAGUGAGCACA
                                          sto-miR156d  1 <[0]*UGACAGAAGAGAGUGAGCACA*[ 0]> 21
                                                         .....*********************...... PP

Targets

Predicted by TargetFinder

NM_001042704 ;   NM_001163771 ;   NM_001257139 ;   NM_001308142 ;   NM_001318915 ;   NM_001348091 ;   NM_001365411 ;   NM_001365412 ;   NM_001365413 ;   NM_001365414 ;   NM_001447 ;   NM_002338 ;   NM_004070 ;   NM_014048 ;   NM_016946 ;   NM_018958 ;   NM_024743 ;   NM_080679 ;   NM_080680 ;   NM_080681 ;   NR_024010 ;  

Predicted by TAPIR

NM_001042704 ;   NM_001257139 ;   NM_001348091 ;   NM_004070 ;   NM_005199 ;   NM_006877 ;   NM_016946 ;   NM_018958 ;   NM_020546 ;   NR_026928 ;