The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR30
  5. sdf-miR30o

Accession: B60534758

Entry

ID: sdf-miR30o
Alias: F3769.O000210.A11
Sequence: UGUAAACAUCCUCGACUGGAAGCG
Description: mir-30 microRNA precursor predicted,partially
Species: 白花蛇舌草  Species latin name: Scleromitrion diffusum
TCM Name:
TCM Resource (Sample number): 白花蛇舌草(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR30ay; acr-miR30l; asc-miR30aq; bhi-miR30aj; cci-miR30ao; cfe-miR30aq; cit-miR30dc; cmd-miR30bg; cmj-miR30d; cof-miR30m; csu-miR30i; fmu-miR30al; ljp-miR30am; poe-miR30bt; sdf-miR30o; sor-miR30cy; tki-miR30aq; zof-miR30as;

Rfam Alignments

>> mir-30  mir-30 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0002   26.1   0.0  cm        1       24 [~           1          24 + [~ 1.00    3' 0.50
                          ??????????  ???????????       NC
                         :<<<<<<<<<<--<<<<<<<<<<<~~~~~~ CS
               mir-30  1 UGuAAACAUCcUcGACuGgaAGCu*[36]> 60
                         UGUAAACAUCCUCGACUGGAAGC
          zof-miR30as  1 UGUAAACAUCCUCGACUGGAAGCG*[ 0]> 24
                         ***********************9...... PP

Targets

Predicted by TargetFinder


Predicted by TAPIR