The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR126
  5. sbc-miR126d

Accession: B59871974

Entry

ID: sbc-miR126d
Alias: F1794.L000003.A25
Sequence: CAUUAUUACUUUUGGUACGCG
Description: microRNA mir-126 predicted
Species: 黄芩  Species latin name: Scutellaria baicalensis
TCM Name: Huangqin(黄芩)  
TCM Resource (Sample number): 黄芩(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR126g; asc-miR126e; bch-miR126e; bpi-miR126; cfe-miR126e; cit-miR126j; cmd-miR126g; cmi-miR126; fsu-miR126b; hcr-miR126g; lgr-miR126; ljn-miR126; ljo-miR126b; mpu-miR126b; poe-miR126h; ppr-miR126d; pvl-miR126c; sba-miR126b; sbc-miR126d; sgi-miR126d; sor-miR126j; tch-miR126c; vph-miR126e; zof-miR126e;

Rfam Alignments

>> mir-126  microRNA mir-126
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0091   18.4   0.0  cm        9       29 ~~           1          21 + ~~ 1.00 5'&3' 0.38
                                                                 ??????????? ??????? ?       NC
                                                            ~~~~~<<<<<<<<<<<-<<<<<<<-<~~~~~~ CS
                                                 mir-126  1 <[8]*CAUUAUUACUuUuGGUACGCG*[44]> 73
                                                                 CAUUAUUACUUUUGGUACGCG
                                             zof-miR126e  1 <[0]*CAUUAUUACUUUUGGUACGCG*[ 0]> 21
                                                            .....*********************...... PP

Targets

Predicted by TargetFinder

NM_001014990 ;   NM_001136156 ;   NM_001142685 ;   NM_014180 ;   NM_014715 ;   NM_014910 ;  

Predicted by TAPIR